RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 GPD1LQ8N335 351 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 CEP120Q8N960 986 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 TRIML1Q8N9V2 468 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 XXYLT1Q8NBI6 393 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 KIAA0895Q8NCT3 520 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 BEST2Q8NFU1 509 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 CACTINQ8WUQ7 758 aaKnown RBP9.3□□□□□ -0.92
SSBP1-208ENST00000469123 KIF12Q96FN5 646 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 FBXL18Q96ME1 805 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 HERC2P3Q9BVR0 1158 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ENTPD7Q9NQZ7 604 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.3□□□□□ -0.924e-9■□□□□ 11.1
SSBP1-208ENST00000469123 AGPAT3Q9NRZ7 376 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 MIOSQ9NXC5 875 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 ADAM28Q9UKQ2 775 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 COG5Q9UP83 839 aa9.3□□□□□ -0.92
SSBP1-208ENST00000469123 TRANK1O15050 2925 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ANKRD63C9JTQ0 380 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 MAPK13O15264 365 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TGFB1I1O43294 461 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TADA2AO75478 443 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 SOD2P04179 222 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 URODP06132 367 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 PRR29P0C7W0 189 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 CTSAP10619 480 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 PTMSP20962 102 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 CASP1P29466 404 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ENPEPQ07075 957 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 KCNA1Q09470 495 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 PNOCQ13519 176 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TMEM132DQ14C87 1099 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 NAB2Q15742 525 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 UPP1Q16831 310 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 AAK1Q2M2I8 961 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 EDRF1Q3B7T1 1238 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ZNF658Q5TYW1 1059 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 FUT10Q6P4F1 479 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ELMSAN1Q6PJG2 1045 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 DCLRE1AQ6PJP8 1040 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 FOXR2Q6PJQ5 311 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 RNF168Q8IYW5 571 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 VPS52Q8N1B4 723 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 MICAL1Q8TDZ2 1067 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TCF25Q9BQ70 676 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 CBWD1Q9BRT8 395 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 FGFBP2Q9BYJ0 223 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 HAPLN2Q9GZV7 340 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ZBP1Q9H171 429 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 RBAKQ9NYW8 714 aaPredicted RBP9.29□□□□□ -0.92
SSBP1-208ENST00000469123 HSPBP1Q9NZL4 362 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 DPP7Q9UHL4 492 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 TRAF3IP3Q9Y228 551 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 FRMD4BQ9Y2L6 1034 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 PCDHA5Q9Y5H7 936 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 ATG2AQ2TAZ0 1938 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
SSBP1-208ENST00000469123 CASTOR2A6NHX0 329 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 LACTBL1A8MY62 500 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 RFXAPO00287 272 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 PODXLO00592 558 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 PSMA7O14818 248 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 GADD45BO75293 160 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 B3GAT3O94766 335 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 MBD3O95983 291 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 HOXD13P35453 343 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 PNPLA4P41247 253 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 TNFSF9P41273 254 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 GLUD2P49448 558 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 ACOT2P49753 483 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 AP3M2P53677 418 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 DSG1Q02413 1049 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 ZBTB6Q15916 424 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 USP41Q3LFD5 358 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 GLRA4Q5JXX5 417 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 SPATA1Q5VX52 437 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 KIAA1841Q6NSI8 718 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 NELFCDQ8IXH7 590 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 HPS3Q969F9 1004 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 ZNF560Q96MR9 790 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 TSG101Q99816 390 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 OXCT2Q9BYC2 517 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 KCTD10Q9H3F6 313 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 MARCH5Q9NX47 278 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
SSBP1-208ENST00000469123 PRG3Q9Y2Y8 225 aaPredicted RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
SSBP1-208ENST00000469123 BICDL2A1A5D9 508 aa9.27□□□□□ -0.93
SSBP1-208ENST00000469123 NT5C1B-RDH14C9J2C7 533 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms