RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 MEFVO15553 781 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 PI15O43692 258 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 HNRNPA1P09651 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 MCF2P10911 925 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 KCNE1P15382 129 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 OR1D2P34982 312 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 CWF19L1Q69YN2 538 aaKnown RBP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 C3orf58Q8NDZ4 430 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 CCDC94Q9BW85 323 aaPredicted RBP16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 MFSD1Q9H3U5 465 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 GOLGA2P5Q9HBQ8 144 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 FAM86C1Q9NVL1 165 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 MTRRQ9UBK8 725 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 WNT16Q9UBV4 365 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 BACE2Q9Y5Z0 518 aa16.23■□□□□ 0.19
SDCCAG3-209ENST00000468963 HOXA9P31269 272 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 YARSP54577 528 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 SLC12A3P55017 1021 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 OSTNP61366 133 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ZNF568Q3ZCX4 644 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ARL6IP4Q66PJ3 421 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 GRASPQ7Z6J2 395 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 TMEM161BQ8NDZ6 487 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ACAP3Q96P50 834 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 PLIN2Q99541 437 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 TOPORSQ9NS56 1045 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 ZFP37Q9Y6Q3 630 aaPredicted RBP16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 CFAP54Q96N23 3096 aa16.22■□□□□ 0.19
SDCCAG3-209ENST00000468963 VWA3AA6NCI4 1184 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 H3BQV1 296 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 TRAPPC3O43617 180 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 C8AP07357 584 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 POU2F2P09086 479 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 PLA2G4BP0C869 781 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 PLS3P13797 630 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 AOC1P19801 751 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 FSHRP23945 695 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 TKTP29401 623 aaKnown RBP16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 BRCC3P46736 316 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 NTHL1P78549 312 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 TMEM119Q4V9L6 283 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 ARSHQ5FYA8 562 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 PPM1LQ5SGD2 360 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 AXDND1Q5T1B0 1012 aaPredicted RBP16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 MPZL3Q6UWV2 235 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 FLCNQ8NFG4 579 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 SNX27Q96L92 541 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 TCHPQ9BT92 498 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 SLC38A7Q9NVC3 462 aa16.21■□□□□ 0.19
SDCCAG3-209ENST00000468963 NOTCH4Q99466 2003 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 KRBA1A5PL33 1030 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 I3L4J1 428 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 CCL16O15467 120 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 TBC1D4O60343 1298 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 TOM1L1O75674 476 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 MAPTP10636 758 aaKnown RBP16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 SRFP11831 508 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 MCM2P49736 904 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 HTR4Q13639 388 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 MRPL58Q14197 206 aaKnown RBP16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 SLC10A6Q3KNW5 377 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 GET4Q7L5D6 327 aaPredicted RBP16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 SIX5Q8N196 739 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 KCNN1Q92952 543 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 RPP25Q9BUL9 199 aaKnown RBP16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 CNTN3Q9P232 1028 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 FBXL21Q9UKT6 434 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 CDY1Q9Y6F8 540 aa16.2■□□□□ 0.18
SDCCAG3-209ENST00000468963 NPHP3-ACAD11A0A0J9YXS1 232 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 PROB1E7EW31 1015 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 PODXLO00592 558 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 SLC26A4O43511 780 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 CFHP08603 1231 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 SMTNP53814 917 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 LARP1BQ659C4 914 aaKnown RBP16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 ZPBP2Q6X784 338 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 ANKS3Q6ZW76 656 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 SLC7A14Q8TBB6 771 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 LRRC15Q8TF66 581 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 AK8Q96MA6 479 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 RTP3Q9BQQ7 232 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 HAPLN2Q9GZV7 340 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 DNMT3BQ9UBC3 853 aaKnown RBP16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 CDH7Q9ULB5 785 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 FAM186AA6NE01 2351 aa16.19■□□□□ 0.18
SDCCAG3-209ENST00000468963 CITO14578 2027 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms