RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PER2O15055 1255 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 TOM1L1O75674 476 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 PIGRP01833 764 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 MCF2P10911 925 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 TXLNAP40222 546 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 GRM5P41594 1212 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 KCNA1Q09470 495 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 DHX8Q14562 1220 aaKnown RBP12.22□□□□□ -0.45
COL4A6-205ENST00000468338 RRAGBQ5VZM2 374 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 PTCRAQ6ISU1 281 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-205ENST00000468338 MPZL3Q6UWV2 235 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 LYPD8Q6UX82 237 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 HAUS6Q7Z4H7 955 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-205ENST00000468338 RBM23Q86U06 439 aaKnown RBP12.22□□□□□ -0.45
COL4A6-205ENST00000468338 GPR65Q8IYL9 337 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 CEP120Q8N960 986 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 RASSF8Q8NHQ8 419 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 DNAJC19Q96DA6 116 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 UHRF1Q96T88 793 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-205ENST00000468338 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
COL4A6-205ENST00000468338 FRMD3A2A2Y4 597 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 MYMKA6NI61 221 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 TK2O00142 265 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 MBTPS2O43462 519 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 CUTAO60888 179 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 FAM13AO94988 1023 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 CXCL14O95715 111 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 SOD2P04179 222 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 THP07101 528 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 IL9P15248 144 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 GTF2BQ00403 316 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 MCL1Q07820 350 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 STRN3Q13033 797 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 TUSC3Q13454 348 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 BMS1Q14692 1282 aaKnown RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 PTPN14Q15678 1187 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 SMAD2Q15796 467 aaKnown RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 ZNF568Q3ZCX4 644 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 SHC4Q6S5L8 630 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 MYCT1Q8N699 235 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 SMRP1Q8NCR6 262 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 NECAB3Q96P71 396 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 PPP1R10Q96QC0 940 aaKnown RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 COLEC11Q9BWP8 271 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 STRA6Q9BX79 667 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 CHST7Q9NS84 486 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 GDAQ9Y2T3 454 aa12.21□□□□□ -0.45
COL4A6-205ENST00000468338 PRG3Q9Y2Y8 225 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-205ENST00000468338 BDP1A6H8Y1 2624 aa12.21□□□□□ -0.46
COL4A6-205ENST00000468338 TCHHQ07283 1943 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 F8W810 466 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 CLASP2O75122 1294 aaKnown RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 NR1I2O75469 434 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 ABCD1P33897 745 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 OR1G1P47890 313 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 NDUFV1P49821 464 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 EMP3P54852 163 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 SMAD4Q13485 552 aaKnown RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 SV2BQ7L1I2 683 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 KCNG4Q8TDN1 519 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 PAAF1Q9BRP4 392 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 HERC2P3Q9BVR0 1158 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 HAPLN2Q9GZV7 340 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 S1PR5Q9H228 398 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 KBTBD4Q9NVX7 518 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 SEL1LQ9UBV2 794 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 BARX2Q9UMQ3 279 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-205ENST00000468338 TBX20Q9UMR3 447 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 HCFC2Q9Y5Z7 792 aa12.2□□□□□ -0.46
COL4A6-205ENST00000468338 SMIM28A0A1B0GU29 152 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 TNFRSF10AO00220 468 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 CLDN3O15551 220 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 FAM189A1O60320 539 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 TBCAO75347 108 aaKnown RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 KCNE1P15382 129 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 HOXB8P17481 243 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 STAT6P42226 847 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 DSG1Q02413 1049 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 NR1H3Q13133 447 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL4A6-205ENST00000468338 ANKRD54Q6NXT1 300 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 FUT10Q6P4F1 479 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
COL4A6-205ENST00000468338 SYCE2Q6PIF2 218 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms