RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SLC38A7Q9NVC3 462 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 CNTN3Q9P232 1028 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
SSBP1-207ENST00000468267 DPP7Q9UHL4 492 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 NR2E1Q9Y466 385 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 TECTAO75443 2155 aa18.69■□□□□ 0.58
SSBP1-207ENST00000468267 SPDYE4A6NLX3 237 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 B3GAT3O94766 335 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 PIGRP01833 764 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 RPL17P18621 184 aaKnown RBP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 ABCD1P33897 745 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 MATR3P43243 847 aaKnown RBP eCLIP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 GTF2BQ00403 316 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 SOX4Q06945 474 aaPredicted RBP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 SLC10A6Q3KNW5 377 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 SEZ6Q53EL9 994 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 ELMSAN1Q6PJG2 1045 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 PRSS55Q6UWB4 352 aaPredicted RBP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 CCDC73Q6ZRK6 1079 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 SV2BQ7L1I2 683 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 PALB2Q86YC2 1186 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 CMASQ8NFW8 434 aaPredicted RBP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 HDAC7Q8WUI4 952 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 PIK3R5Q8WYR1 880 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 DDX27Q96GQ7 796 aaKnown RBP18.68■□□□□ 0.58
SSBP1-207ENST00000468267 GOLGA2P5Q9HBQ8 144 aa18.68■□□□□ 0.58
SSBP1-207ENST00000468267 MYMKA6NI61 221 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 HNRNPDLO14979 420 aaKnown RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 SPTLC2O15270 562 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 PPP6R2O75170 966 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 CLTAP09496 248 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 ZSCAN22P10073 491 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 COL9A1P20849 921 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 NMT1P30419 496 aaKnown RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 LIG4P49917 911 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 FOXD4L5Q5VV16 416 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 LILRA6Q6PI73 481 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 DYMQ7RTS9 669 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 CEP57Q86XR8 500 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 LNX1Q8TBB1 728 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 FEZF2Q8TBJ5 459 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 FOXD4L4Q8WXT5 416 aaPredicted RBP18.67■□□□□ 0.58
SSBP1-207ENST00000468267 DDX12PQ92771 950 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 ST6GALNAC4Q9H4F1 302 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 PLEKHA4Q9H4M7 779 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 DENND4AQ7Z401 1863 aa18.67■□□□□ 0.58
SSBP1-207ENST00000468267 A0A087X0B3 334 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 TGM5O43548 720 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 FGFR3P22607 806 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 RPL9P32969 192 aaKnown RBP18.66■□□□□ 0.58
SSBP1-207ENST00000468267 PSMD5Q16401 504 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 KYAT1Q16773 422 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 PDXDC1Q6P996 788 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 C15orf39Q6ZRI6 1047 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 C3orf58Q8NDZ4 430 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 C18orf25Q96B23 403 aaPredicted RBP18.66■□□□□ 0.58
SSBP1-207ENST00000468267 DNAJC19Q96DA6 116 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 CLSTN3Q9BQT9 956 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 PLEKHA5Q9HAU0 1116 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 DOCK6Q96HP0 2047 aa18.66■□□□□ 0.58
SSBP1-207ENST00000468267 CCDC195A0A1B0GUA6 201 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 TTC26A0AVF1 554 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 PODXLO00592 558 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 FAM189A1O60320 539 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 PAPLNO95428 1278 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 YEATS4O95619 227 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 F13A1P00488 732 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 CXCL8P10145 99 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 SP100P23497 879 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-207ENST00000468267 STAT6P42226 847 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 ZC2HC1CQ53FD0 456 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-207ENST00000468267 SLC39A4Q6P5W5 647 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 ZNF720Q7Z2F6 126 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 SFR1Q86XK3 245 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 MAP4K3Q8IVH8 894 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 EDAQ92838 391 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 RHOBTB2Q9BYZ6 727 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 SEL1LQ9UBV2 794 aa18.65■□□□□ 0.58
SSBP1-207ENST00000468267 WDFY4Q6ZS81 3184 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 A0A0B4J269 797 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 PRR33A8MZF0 331 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 C2CD4DB7Z1M9 353 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 OGTO15294 1046 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 RFPL2O75678 378 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 MYBP10242 640 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 GAP43P17677 238 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 TNFSF9P41273 254 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 KREMEN2Q8NCW0 462 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 USTQ9Y2C2 406 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 ZDBF2Q9HCK1 2354 aa18.64■□□□□ 0.57
SSBP1-207ENST00000468267 ANKRD63C9JTQ0 380 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms