RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 DHX58Q96C10 678 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 POP1Q99575 1024 aaKnown RBP12.61□□□□□ -0.39
CDHR3-205ENST00000468143 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 A0A0C4DFX4 3053 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 FAM86C2PA6NEL3 165 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 LOC730098B7Z3J9 87 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
CDHR3-205ENST00000468143 CUTAO60888 179 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 ADH1AP07327 375 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 KCNE1P15382 129 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 ME1P48163 572 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 ITIH3Q06033 890 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 HERC4Q5GLZ8 1057 aaPredicted RBP12.6□□□□□ -0.39
CDHR3-205ENST00000468143 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 SLC39A4Q6P5W5 647 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 LNX1Q8TBB1 728 aaPredicted RBP12.6□□□□□ -0.39
CDHR3-205ENST00000468143 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 UROC1Q96N76 676 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 POMKQ9H5K3 350 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
CDHR3-205ENST00000468143 MAN1C1Q9NR34 630 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 PANK4Q9NVE7 773 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 MUTYHQ9UIF7 546 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 PCDHA7Q9UN72 937 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
CDHR3-205ENST00000468143 BRWD1Q9NSI6 2320 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-205ENST00000468143 LACTBL1A8MY62 500 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 PODXLO00592 558 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 ADAM12O43184 909 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 TGM5O43548 720 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 GLUD1P00367 558 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 PIGRP01833 764 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 CLTAP09496 248 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 KCNA1Q09470 495 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
CDHR3-205ENST00000468143 MAP4K3Q8IVH8 894 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 KCNN1Q92952 543 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
CDHR3-205ENST00000468143 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 MSTO1Q9BUK6 570 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 FGFBP2Q9BYJ0 223 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDHR3-205ENST00000468143 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 FNIP2Q9P278 1114 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 TUBGCP4Q9UGJ1 667 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 CFAP45Q9UL16 551 aa12.59□□□□□ -0.39
CDHR3-205ENST00000468143 A0A0B4J269 797 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 CCDC195A0A1B0GUA6 201 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 TMEM189-UBE2V1I3L0A0 370 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 OGTO15294 1046 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 FAM189A1O60320 539 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 RFPL2O75678 378 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 GCNT3O95395 438 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 GAP43P17677 238 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 SCP2P22307 547 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 FGFR3P22607 806 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 TKTP29401 623 aaKnown RBP12.58□□□□□ -0.4
CDHR3-205ENST00000468143 MTHFRP42898 656 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 ACOT2P49753 483 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 GUCY2FP51841 1108 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 CASP5P51878 434 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 ELAVL2Q12926 359 aaKnown RBP12.58□□□□□ -0.4
CDHR3-205ENST00000468143 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
CDHR3-205ENST00000468143 E2F4Q16254 413 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 PSMD5Q16401 504 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 GPR149Q86SP6 731 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 PIK3R5Q8WYR1 880 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 HPS3Q969F9 1004 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 ST6GALNAC4Q9H4F1 302 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 SFXN1Q9H9B4 322 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 RPF1Q9H9Y2 349 aaKnown RBP12.58□□□□□ -0.4
CDHR3-205ENST00000468143 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 RCOR1Q9UKL0 485 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 NUB1Q9Y5A7 615 aa12.58□□□□□ -0.4
CDHR3-205ENST00000468143 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.4
CDHR3-205ENST00000468143 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 DCXO43602 365 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 TRAPPC3O43617 180 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 PRPF6O94906 941 aaKnown RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 ALADP13716 330 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 CASP1P29466 404 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 RPL9P32969 192 aaKnown RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 OR1D2P34982 312 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 LILRA6Q6PI73 481 aa12.57□□□□□ -0.4
CDHR3-205ENST00000468143 RSPO2Q6UXX9 243 aaPredicted RBP12.57□□□□□ -0.4
CDHR3-205ENST00000468143 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms