RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 ERV3-1Q14264 604 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 ODF2Q5BJF6 829 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 BEND6Q5SZJ8 279 aaPredicted RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 SHQ1Q6PI26 577 aaKnown RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 ZYG11AQ6WRX3 759 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 CCDC83Q8IWF9 413 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 RRP36Q96EU6 259 aaKnown RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 RBM17Q96I25 401 aaKnown RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 FAM167AQ96KS9 214 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 ZSCAN31Q96LW9 406 aaPredicted RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 FNBP1Q96RU3 617 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 API5Q9BZZ5 524 aaKnown RBP8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 VTA1Q9NP79 307 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 RTEL1Q9NZ71 1219 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 MOSPD1Q9UJG1 213 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 DIP2CQ9Y2E4 1556 aa8.21□□□□□ -1.09
SPTBN1-204ENST00000467371 TTC21AQ8NDW8 1320 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 L7N2F9 121 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 CHUKO15111 745 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 AP1G1O43747 822 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SHOX2O60902 331 aaPredicted RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SOAT2O75908 522 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 MYCP01106 439 aaPredicted RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 CSTBP04080 98 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PDHBP11177 359 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 CKBP12277 381 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 RAG1P15918 1043 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PORP16435 677 aaPredicted RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PTPN2P17706 415 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 LRP8Q14114 963 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PLCL1Q15111 1095 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TAF5Q15542 800 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 FBXW10Q5XX13 1052 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 RGS9BPQ6ZS82 235 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 RSPH3Q86UC2 560 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 KRT78Q8N1N4 520 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 RFFLQ8WZ73 363 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 EDEM1Q92611 657 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 VPS50Q96JG6 964 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 CARD6Q9BX69 1037 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 MRPL4Q9BYD3 311 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TMEM134Q9H6X4 195 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 DDX19AQ9NUU7 478 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 APOBEC2Q9Y235 224 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PIK3C2BO00750 1634 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 PTPRMP28827 1452 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 ABCC4O15439 1325 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 ZNF335Q9H4Z2 1342 aaPredicted RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TNFSF4P23510 183 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 HAAOP46952 286 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TUBA1BP68363 451 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SNAPC2Q13487 334 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 HGSNATQ68CP4 663 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TUBA1AQ71U36 451 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 CPOQ8IVL8 374 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 FAM71DQ8N9W8 422 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 SCG3Q8WXD2 468 aaKnown RBP8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 AGXT2Q9BYV1 514 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 JMJD4Q9H9V9 463 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 RAB21Q9UL25 225 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 EXOC7Q9UPT5 735 aa8.21□□□□□ -1.1
SPTBN1-204ENST00000467371 TNRQ92752 1358 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 UBE2CO00762 179 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 NCK2O43639 380 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ATP5BP06576 529 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 TROVE2P10155 538 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 C19orf57Q0VDD7 668 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 FAM209AQ5JX71 171 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 FDX2Q6P4F2 183 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 HDXQ7Z353 690 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 VSIG10LQ86VR7 867 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 CNNM3Q8NE01 707 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 TBC1D5Q92609 795 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 SYNCQ9H7C4 482 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 PHAXQ9H814 394 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 DDX4Q9NQI0 724 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 PALD1Q9ULE6 856 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ADGRL3Q9HAR2 1447 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 TRAV6A0A075B6T7 132 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 PI4KAP2A4QPH2 592 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 M0R2C6 588 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 THAP12O43422 761 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 PIAS2O75928 621 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 TXLNAP40222 546 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 RBP5P82980 135 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 DNM1Q05193 864 aaKnown RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 BTG3Q14201 252 aaPredicted RBP8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 KIAA0319LQ8IZA0 1049 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
SPTBN1-204ENST00000467371 ADAMTS15Q8TE58 950 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms