RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 KIF4AO95239 1232 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 SMC2O95347 1197 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 NFICP08651 508 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 IRS1P35568 1242 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 HSP90AA2PQ14568 343 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 CD302Q8IX05 232 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 GOLGA5Q8TBA6 731 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 SMARCE1Q969G3 411 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 SAAL1Q96ER3 474 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 UROC1Q96N76 676 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 FAM193BQ96PV7 902 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 FAM213AQ9BRX8 229 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 ZBP1Q9H171 429 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 ASB7Q9H672 318 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 GOLGA2P5Q9HBQ8 144 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 TLR9Q9NR96 1032 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.49
MSH5-212ENST00000467319 DERAQ9Y315 318 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 C2CD2Q9Y426 696 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 TSC2P49815 1807 aa12.02□□□□□ -0.49
MSH5-212ENST00000467319 PDXKO00764 312 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 IGFBP4P22692 258 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 OR1G1P47890 313 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 ERVFC1P60507 584 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 NFIL3Q16649 462 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 UPP1Q16831 310 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
MSH5-212ENST00000467319 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
MSH5-212ENST00000467319 CD300LGQ6UXG3 332 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 CBWD2Q8IUF1 395 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 SLC9A9Q8IVB4 645 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
MSH5-212ENST00000467319 GPD1LQ8N335 351 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 C3orf58Q8NDZ4 430 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 HERC2P3Q9BVR0 1158 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 CLSTN2Q9H4D0 955 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 NSUN3Q9H649 340 aaKnown RBP12.01□□□□□ -0.49
MSH5-212ENST00000467319 DMAC2Q9NW81 257 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
MSH5-212ENST00000467319 STK39Q9UEW8 545 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 MAN1B1Q9UKM7 699 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 ADAM28Q9UKQ2 775 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 FAN1Q9Y2M0 1017 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 PCDHGC5Q9Y5F6 944 aa12.01□□□□□ -0.49
MSH5-212ENST00000467319 VWA8A3KMH1 1905 aa12□□□□□ -0.49
MSH5-212ENST00000467319 KIF20AO95235 890 aa12□□□□□ -0.49
MSH5-212ENST00000467319 IL18RAPO95256 599 aa12□□□□□ -0.49
MSH5-212ENST00000467319 LDHAP00338 332 aaKnown RBP12□□□□□ -0.49
MSH5-212ENST00000467319 SOD2P04179 222 aa12□□□□□ -0.49
MSH5-212ENST00000467319 ALDH2P05091 517 aa12□□□□□ -0.49
MSH5-212ENST00000467319 CTSAP10619 480 aa12□□□□□ -0.49
MSH5-212ENST00000467319 CYP3A5P20815 502 aa12□□□□□ -0.49
MSH5-212ENST00000467319 BMP6P22004 513 aa12□□□□□ -0.49
MSH5-212ENST00000467319 IGFBP6P24592 240 aaPredicted RBP12□□□□□ -0.49
MSH5-212ENST00000467319 LRPAP1P30533 357 aa12□□□□□ -0.49
MSH5-212ENST00000467319 CLCNKBP51801 687 aa12□□□□□ -0.49
MSH5-212ENST00000467319 KRT17Q04695 432 aa12□□□□□ -0.49
MSH5-212ENST00000467319 PTPN14Q15678 1187 aa12□□□□□ -0.49
MSH5-212ENST00000467319 SNRNP35Q16560 246 aaKnown RBP12□□□□□ -0.49
MSH5-212ENST00000467319 SPATA1Q5VX52 437 aa12□□□□□ -0.49
MSH5-212ENST00000467319 JADE1Q6IE81 842 aa12□□□□□ -0.49
MSH5-212ENST00000467319 FUT10Q6P4F1 479 aa12□□□□□ -0.49
MSH5-212ENST00000467319 RABGGTAQ92696 567 aa12□□□□□ -0.49
MSH5-212ENST00000467319 KIF12Q96FN5 646 aa12□□□□□ -0.49
MSH5-212ENST00000467319 TCF25Q9BQ70 676 aa12□□□□□ -0.49
MSH5-212ENST00000467319 COLEC11Q9BWP8 271 aa12□□□□□ -0.49
MSH5-212ENST00000467319 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
MSH5-212ENST00000467319 GZF1Q9H116 711 aaPredicted RBP12□□□□□ -0.49
MSH5-212ENST00000467319 PCIF1Q9H4Z3 704 aa12□□□□□ -0.49
MSH5-212ENST00000467319 KIAA1586Q9HCI6 787 aa12□□□□□ -0.49
MSH5-212ENST00000467319 UBQLN1Q9UMX0 589 aaKnown RBP12□□□□□ -0.49
MSH5-212ENST00000467319 IRAK3Q9Y616 596 aa12□□□□□ -0.49
MSH5-212ENST00000467319 SF3B1O75533 1304 aaKnown RBP eCLIP12□□□□□ -0.49
MSH5-212ENST00000467319 PTPRJQ12913 1337 aa12□□□□□ -0.49
MSH5-212ENST00000467319 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 PODXLO00592 558 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 CLIC2O15247 247 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 NR3C1P04150 777 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
MSH5-212ENST00000467319 PRCPP42785 496 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 AARSP49588 968 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■■■ 61.8
MSH5-212ENST00000467319 CYP2J2P51589 502 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 SPAG1Q07617 926 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 HYAL1Q12794 435 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 MORC3Q14149 939 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 MYBPC2Q14324 1141 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 TMEM132DQ14C87 1099 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 TCEAL5Q5H9L2 206 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 ADGRD2Q7Z7M1 963 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 NT5DC4Q86YG4 428 aa11.99□□□□□ -0.49
MSH5-212ENST00000467319 ZC3H3Q8IXZ2 948 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms