RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMC4-207ENST00000467263 SLC35B2Q8TB61 432 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 STON2Q8WXE9 905 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 PDCD2LQ9BRP1 358 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 SLC46A2Q9BY10 475 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 CYP4F11Q9HBI6 524 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 AKIP1Q9NQ31 210 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 SYBUQ9NX95 663 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 SIK3Q9Y2K2 1263 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 MRFAP1Q9Y605 127 aa5.62□□□□□ -1.51
SMC4-207ENST00000467263 PRR5-ARHGAP8B1AHC4 643 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 ZNF185O15231 689 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 NDUFA10O95299 355 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 CCND1P24385 295 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 PLA2G5P39877 138 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 SLC6A9P48067 706 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 RNASE9P60153 205 aaKnown RBP5.61□□□□□ -1.51
SMC4-207ENST00000467263 IGBP1P78318 339 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 DOK3Q7L591 496 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 GPRIN1Q7Z2K8 1008 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 RNF169Q8NCN4 708 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 CCHCR1Q8TD31 782 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 SSH1Q8WYL5 1049 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 TEKT5Q96M29 485 aa5.61□□□□□ -1.51
SMC4-207ENST00000467263 SENP6Q9GZR1 1112 aaPredicted RBP5.61□□□□□ -1.51
SMC4-207ENST00000467263 EPN1Q9Y6I3 576 aaPredicted RBP5.61□□□□□ -1.51
SMC4-207ENST00000467263 UNC119BA6NIH7 251 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 B5MCH6 92 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 ENDOD1O94919 500 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 TYRP1P17643 537 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 FPR1P21462 350 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 FLT3LGP49771 235 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 KIF23Q02241 960 aaPredicted RBP5.6□□□□□ -1.51
SMC4-207ENST00000467263 FOXI1Q12951 378 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 METTL24Q5JXM2 366 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
SMC4-207ENST00000467263 GDF7Q7Z4P5 450 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
SMC4-207ENST00000467263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMC4-207ENST00000467263 TFAP2CQ92754 450 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 RAB24Q969Q5 203 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 LANCL2Q9NS86 450 aa5.6□□□□□ -1.51
SMC4-207ENST00000467263 AJAP1Q9UKB5 411 aaPredicted RBP5.6□□□□□ -1.51
SMC4-207ENST00000467263 TBKBP1A7MCY6 615 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 FAM171A2A8MVW0 826 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 CXorf49A8MYA2 514 aaPredicted RBP5.59□□□□□ -1.51
SMC4-207ENST00000467263 RAP2AP10114 183 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 ALOX15P16050 662 aaPredicted RBP5.59□□□□□ -1.51
SMC4-207ENST00000467263 ZSCAN20P17040 1043 aaPredicted RBP5.59□□□□□ -1.51
SMC4-207ENST00000467263 NCLP19338 710 aaKnown RBP5.59□□□□□ -1.51
SMC4-207ENST00000467263 RAP2BP61225 183 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 BEAN1Q3B7T3 259 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 FAM47AQ5JRC9 791 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
SMC4-207ENST00000467263 EFCAB2Q5VUJ9 269 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 ZKSCAN2Q63HK3 967 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 AFMIDQ63HM1 303 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 ARHGEF19Q8IW93 802 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 RHOT1Q8IXI2 618 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 ADAM2Q99965 735 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 C7orf25Q9BPX7 421 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 POGKQ9P215 609 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 SERPINB13Q9UIV8 391 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 PCDHA13Q9Y5I0 950 aa5.59□□□□□ -1.51
SMC4-207ENST00000467263 ATRNL1Q5VV63 1379 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 COL11A2P13942 1736 aaPredicted RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 GUCY1A2P33402 732 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 ALDH1A3P47895 512 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 SLC16A1P53985 500 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 KRT85P78386 507 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 NHLH2Q02577 135 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 BMT2Q1RMZ1 405 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 PDCD4Q53EL6 469 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 GLCCI1Q86VQ1 547 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 ZGPATQ8N5A5 531 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 OR10H5Q8NGA6 315 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 STAG1Q8WVM7 1258 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 SLC13A1Q9BZW2 595 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 ALG13Q9NP73 1137 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 ADARB2Q9NS39 739 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 DDX56Q9NY93 547 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 SAP30BPQ9UHR5 308 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
SMC4-207ENST00000467263 MAP3K2Q9Y2U5 619 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 ACTL7AQ9Y615 435 aa5.58□□□□□ -1.52
SMC4-207ENST00000467263 RNASET2O00584 256 aaKnown RBP5.57□□□□□ -1.52
SMC4-207ENST00000467263 AMY1AP04745 511 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 IL2RBP14784 551 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 PCSK1P29120 753 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 EXOSC10Q01780 885 aaKnown RBP5.57□□□□□ -1.52
SMC4-207ENST00000467263 SP140Q13342 867 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 UAP1L1Q3KQV9 507 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 STRIP1Q5VSL9 837 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 EFCAB12Q6NXP0 572 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
SMC4-207ENST00000467263 RD3Q7Z3Z2 195 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms