RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ANKRD53Q8N9V6 530 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 PHKBQ93100 1093 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 LRRC27Q9C0I9 530 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 TMEM168Q9H0V1 697 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 BCO1Q9HAY6 547 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 EPB41L4AQ9HCS5 686 aaPredicted RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 SARS2Q9NP81 518 aaKnown RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 SACM1LQ9NTJ5 587 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 STK32BQ9NY57 414 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ADAM29Q9UKF5 820 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 TCRBV7S2A1N4TA0A589 114 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 F2RL2O00254 374 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 NRP1O14786 923 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 PAX4O43316 350 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 IL6STP40189 918 aaPredicted RBP5.04□□□□□ -1.6
VPS13A-209ENST00000467124 KIR2DL3P43628 341 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 SARSP49591 514 aaKnown RBP5.04□□□□□ -1.6
VPS13A-209ENST00000467124 MAPK10P53779 464 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 LINC00310P59036 64 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 ATP8B2P98198 1209 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 FMO1Q01740 532 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 MTM1Q13496 603 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 PMS2P11Q13670 270 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 RAB39AQ14964 217 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 GAGE13Q4V321 117 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 SESTD1Q86VW0 696 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 OR5M3Q8NGP4 307 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 DEPTORQ8TB45 409 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 DACT3Q96B18 629 aaPredicted RBP5.04□□□□□ -1.6
VPS13A-209ENST00000467124 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 OR10A2Q9H208 303 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 CNNM1Q9NRU3 951 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
VPS13A-209ENST00000467124 MORC2Q9Y6X9 1032 aaPredicted RBP5.04□□□□□ -1.6
VPS13A-209ENST00000467124 PMS2P1A4D2B8 440 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 NT5C1B-RDH14C9J2C7 533 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 KIAA0391O15091 583 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 GASTP01350 101 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 KRT1P04264 644 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 HARSP12081 509 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 PRDX5P30044 214 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CSF2RBP32927 897 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CHKAP35790 457 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 KCNJ5P48544 419 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 RAP2BP61225 183 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 USP10Q14694 798 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CNGA2Q16280 664 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 PKN1Q16512 942 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 FAM214AQ32MH5 1076 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 ZNF568Q3ZCX4 644 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 MFSD14BQ5SR56 506 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 AGBL4Q5VU57 503 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 AFMIDQ63HM1 303 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 APBB1IPQ7Z5R6 666 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CARFQ8N187 725 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 LINC01356Q8N9X3 169 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 MYRIPQ8NFW9 859 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 BRIX1Q8TDN6 353 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 ANKS1AQ92625 1134 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 SLC7A6OSQ96CW6 309 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CDC5LQ99459 802 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 MRPL46Q9H2W6 279 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 TRMT13Q9NUP7 481 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 SMG5Q9UPR3 1016 aaKnown RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 LRCH1Q9Y2L9 728 aa5.03□□□□□ -1.6
VPS13A-209ENST00000467124 CTDP1Q9Y5B0 961 aaPredicted RBP5.03□□□□□ -1.6
VPS13A-209ENST00000467124 MYO1FO00160 1098 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 GRM6O15303 877 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 STC2O76061 302 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 SASH1O94885 1247 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 GUCY1A2P33402 732 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 CRHR1P34998 444 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 PPM1AP35813 382 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 AFF3P51826 1226 aaKnown RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 SOX8P57073 446 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 CTXN1P60606 82 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 NOMO3P69849 1222 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 NFYCQ13952 458 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 ELF2Q15723 593 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 KCNA10Q16322 511 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 HIBCHQ6NVY1 386 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 TMED8Q6PL24 325 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 UBE3BQ7Z3V4 1068 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 RALYLQ86SE5 291 aaKnown RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 FAM124AQ86V42 546 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 MYLK4Q86YV6 388 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 TXNDC5Q8NBS9 432 aaKnown RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 SLC35B2Q8TB61 432 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 ADAMTS17Q8TE56 1095 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 CYFIP2Q96F07 1278 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 LCORQ96JN0 433 aaPredicted RBP5.02□□□□□ -1.61
VPS13A-209ENST00000467124 EPC1Q9H2F5 836 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 ARFGAP3Q9NP61 516 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 CALCOCO1Q9P1Z2 691 aa5.02□□□□□ -1.61
VPS13A-209ENST00000467124 SLC45A2Q9UMX9 530 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms