RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PHF2O75151 1096 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 KELP23276 732 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 CTSSP25774 331 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 GRIA3P42263 894 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 MAPK10P53779 464 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 SSBP2P81877 361 aaPredicted RBP5.58□□□□□ -1.52
XRN1-206ENST00000467077 SF3B3Q15393 1217 aaKnown RBP5.58□□□□□ -1.52
XRN1-206ENST00000467077 NBPF8Q3BBV2 869 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 SLC9A4Q6AI14 798 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 CLUHP3Q96NS8 147 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
XRN1-206ENST00000467077 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
XRN1-206ENST00000467077 E9PSI1 815 aa5.57□□□□□ -1.52
XRN1-206ENST00000467077 GEN1Q17RS7 908 aa5.57□□□□□ -1.52
XRN1-206ENST00000467077 GPR158Q5T848 1215 aa5.57□□□□□ -1.52
XRN1-206ENST00000467077 DENND1AQ8TEH3 1009 aa5.57□□□□□ -1.52
XRN1-206ENST00000467077 KCNG1Q9UIX4 513 aa5.57□□□□□ -1.52
XRN1-206ENST00000467077 H3BNC9 293 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 MPPED1O15442 326 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 POMCP01189 267 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 RAP2AP10114 183 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 POLGP54098 1239 aaPredicted RBP5.56□□□□□ -1.52
XRN1-206ENST00000467077 SERINC3Q13530 473 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 FAM153CQ494X1 144 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 SUMO4Q6EEV6 95 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 ZNF572Q7Z3I7 529 aaPredicted RBP5.56□□□□□ -1.52
XRN1-206ENST00000467077 TECPR1Q7Z6L1 1165 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 REPS2Q8NFH8 660 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 FBXL20Q96IG2 436 aa5.56□□□□□ -1.52
XRN1-206ENST00000467077 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
XRN1-206ENST00000467077 RPTORQ8N122 1335 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 KPNA1P52294 538 aaPredicted RBP5.55□□□□□ -1.52
XRN1-206ENST00000467077 MORN5Q5VZ52 161 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 TRMT2AQ8IZ69 625 aaKnown RBP5.55□□□□□ -1.52
XRN1-206ENST00000467077 CHTF18Q8WVB6 975 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 ARMC5Q96C12 935 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 MRI1Q9BV20 369 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 SEMA4CQ9C0C4 833 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 BHMT2Q9H2M3 363 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
XRN1-206ENST00000467077 PNPLA7Q6ZV29 1317 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 MOSPD3O75425 235 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 NTN1O95631 604 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 ATP5JP18859 108 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 LSP1P33241 339 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 SREBF1P36956 1147 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 MANFP55145 182 aaKnown RBP5.54□□□□□ -1.52
XRN1-206ENST00000467077 FOXG1P55316 489 aaPredicted RBP5.54□□□□□ -1.52
XRN1-206ENST00000467077 SP140Q13342 867 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 MST1LQ2TV78 715 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 KIAA0895LQ68EN5 471 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 ZNF610Q8N9Z0 462 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 SEMA6DQ8NFY4 1073 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 TFAP2BQ92481 460 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 MOCS1Q9NZB8 636 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 TMPRSS11EQ9UL52 423 aa5.54□□□□□ -1.52
XRN1-206ENST00000467077 AOX1Q06278 1338 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 F2P00734 622 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 ALOX15P16050 662 aaPredicted RBP5.53□□□□□ -1.52
XRN1-206ENST00000467077 EPHB2P29323 1055 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 RAPGEF1Q13905 1077 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 TRIM25Q14258 630 aaKnown RBP5.53□□□□□ -1.52
XRN1-206ENST00000467077 KIF18BQ86Y91 864 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 UHRF1Q96T88 793 aaPredicted RBP5.53□□□□□ -1.52
XRN1-206ENST00000467077 ANLNQ9NQW6 1124 aa5.53□□□□□ -1.52
XRN1-206ENST00000467077 CCDC78A2IDD5 438 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 LCHNA4D1U4 455 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 SNHG28P0DPA3 235 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 PHC1P78364 1004 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 AFMIDQ63HM1 303 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 FBXO18Q8NFZ0 1043 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 OR7D4Q8NG98 312 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 MED15Q96RN5 788 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 PNKPQ96T60 521 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 ORAI3Q9BRQ5 295 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 TANGO6Q9C0B7 1094 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 WWOXQ9NZC7 414 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 BTBD3Q9Y2F9 522 aa5.52□□□□□ -1.53
XRN1-206ENST00000467077 GCOM1H8Y6P7 765 aaPredicted RBP5.51□□□□□ -1.53
XRN1-206ENST00000467077 INSIG1O15503 277 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 TGM5O43548 720 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 KDM1AO60341 852 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 RAB11FIP3O75154 756 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 OCRLQ01968 901 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 DSG1Q02413 1049 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 UBXN2BQ14CS0 331 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 TMEM119Q4V9L6 283 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 PITRM1Q5JRX3 1037 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 GJC2Q5T442 439 aaPredicted RBP5.51□□□□□ -1.53
XRN1-206ENST00000467077 VWA1Q6PCB0 445 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 FRMD7Q6ZUT3 714 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 NEK8Q86SG6 692 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 LYSMD2Q8IV50 215 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 SLC41A1Q8IVJ1 513 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 NXPE1Q8N323 547 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 PADI4Q9UM07 663 aa5.51□□□□□ -1.53
XRN1-206ENST00000467077 SIK3Q9Y2K2 1263 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms