RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 NUGGCQ68CJ6 796 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 TEPPQ6URK8 271 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 MAMDC2Q7Z304 686 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 SDCCAG8Q86SQ7 713 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 FAM26EQ8N5C1 309 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 ARRDC4Q8NCT1 418 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 MGARPQ8TDB4 240 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 ZNF606Q8WXB4 792 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 LCORQ96JN0 433 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 ALG1Q9BT22 464 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 UTP14AQ9BVJ6 771 aaKnown RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 KATNAL1Q9BW62 490 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 TRIM7Q9C029 511 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 DEF6Q9H4E7 631 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 NLRC4Q9NPP4 1024 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 SEPT10Q9P0V9 454 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 GIMAP2Q9UG22 337 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 LRRFIP2Q9Y608 721 aaKnown RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 PCF11O94913 1555 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ARHGEF40Q8TER5 1519 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ANO9A1A5B4 782 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 CCDC66A2RUB6 948 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TSPY2A6NKD2 308 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TBKBP1A7MCY6 615 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 IL33O95760 270 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 LRG1P02750 347 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 PARP1P09874 1014 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 IFIT1P09914 478 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TSPY3P0CV98 308 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TSPY8P0CW00 308 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 HSPA1LP34931 641 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 STAT5AP42229 794 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 PDE6CP51160 858 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 GUCY2FP51841 1108 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TSPY1Q01534 308 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ZBTB17Q13105 803 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 RTP5Q14D33 572 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 C1orf228Q6PIY5 440 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 DBX2Q6ZNG2 339 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 PLEKHH3Q7Z736 793 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 NLRP14Q86W24 1093 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 SPATS2Q86XZ4 545 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 MYLK4Q86YV6 388 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 CCDC65Q8IXS2 484 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 CEP57L1Q8IYX8 460 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ZBTB38Q8NAP3 1195 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 KIAA1524Q8TCG1 905 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 CHAC2Q8WUX2 184 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 RABGGTAQ92696 567 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 GJA10Q969M2 543 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 HOOK2Q96ED9 719 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 HIC2Q96JB3 615 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 PPM1MQ96MI6 270 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ADAM7Q9H2U9 754 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 KCTD10Q9H3F6 313 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 RRAGDQ9NQL2 400 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 WDR35Q9P2L0 1181 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 LAMP5Q9UJQ1 280 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 V9GYY5 206 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 MYO5CQ9NQX4 1742 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 DENND4BO75064 1496 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-212ENST00000466845 CCDC18Q5T9S5 1454 aa6.32□□□□□ -1.4
LRCH3-212ENST00000466845 FRMPD1Q5SYB0 1578 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 MSCO60682 206 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 CYP1A2P05177 515 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 MYBL2P10244 700 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 GNAT1P11488 350 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 MUTP22033 750 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 SKIV2L2P42285 1042 aaKnown RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 ECE1P42892 770 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 KCNJ4P48050 445 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 ADAM9Q13443 819 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 HABP4Q5JVS0 413 aaKnown RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 METTL24Q5JXM2 366 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 INTS11Q5TA45 600 aaKnown RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 NAT8LQ8N9F0 302 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 PIP4K2CQ8TBX8 421 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 PTPRN2Q92932 1015 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 BICD1Q96G01 975 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 DHTKD1Q96HY7 919 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 CLMNQ96JQ2 1002 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 CDC6Q99741 560 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 TACO1Q9BSH4 297 aaKnown RBP6.31□□□□□ -1.4
LRCH3-212ENST00000466845 JAM3Q9BX67 310 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 CAPS2Q9BXY5 557 aa6.31□□□□□ -1.4
LRCH3-212ENST00000466845 RHOBTB2Q9BYZ6 727 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms