RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SLC38A7Q9NVC3 462 aa10.33□□□□□ -0.76
SDCCAG3-208ENST00000466579 ADAM28Q9UKQ2 775 aa10.33□□□□□ -0.76
SDCCAG3-208ENST00000466579 AGO2Q9UKV8 859 aaKnown RBP10.33□□□□□ -0.76
SDCCAG3-208ENST00000466579 PCDHGC5Q9Y5F6 944 aa10.33□□□□□ -0.76
SDCCAG3-208ENST00000466579 HIDE1A8MVS5 230 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 F8W810 466 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 KIAA0391O15091 583 aaKnown RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 TGFB1I1O43294 461 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 C1RP00736 705 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 CXCL8P10145 99 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 HARSP12081 509 aaKnown RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 CYP3A5P20815 502 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 LRPAP1P30533 357 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 RPL9P32969 192 aaKnown RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 LTBRP36941 435 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 DSG1Q02413 1049 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 ADAM15Q13444 863 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 KCNB1Q14721 858 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 PTPN14Q15678 1187 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 UPP1Q16831 310 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 KMT5BQ4FZB7 885 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 GLRA4Q5JXX5 417 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 KIAA0319Q5VV43 1072 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 DCLRE1AQ6PJP8 1040 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 C12orf56Q8IXR9 622 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 KIAA0895Q8NCT3 520 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 HLA-CQ95604 372 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 ASB7Q9H672 318 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 UBE2ZQ9H832 354 aaPredicted RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 PRG3Q9Y2Y8 225 aaPredicted RBP10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 DERAQ9Y315 318 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 VWA8A3KMH1 1905 aa10.32□□□□□ -0.76
SDCCAG3-208ENST00000466579 GOLGA6L4A6NEF3 574 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 CASTOR2A6NHX0 329 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 LACTBL1A8MY62 500 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 KIF4AO95239 1232 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 CXCL14O95715 111 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 GLP2RO95838 553 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 LDHAP00338 332 aaKnown RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 RPN1P04843 607 aaKnown RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 PRR29P0C7W0 189 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 MATR3P43243 847 aaKnown RBP eCLIP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 PPP2R3AQ06190 1150 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 STK4Q13043 487 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 BMS1Q14692 1282 aaKnown RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 LEXMQ3ZCV2 418 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 PLPP4Q5VZY2 271 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 TAS1R1Q7RTX1 841 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 TMC7Q7Z402 723 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 SPATA20Q8TB22 786 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 POMGNT1Q8WZA1 660 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 C18orf25Q96B23 403 aaPredicted RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 CBWD1Q9BRT8 395 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 GPR62Q9BZJ7 368 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 TLE6Q9H808 572 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 RPF1Q9H9Y2 349 aaKnown RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 ENTPD7Q9NQZ7 604 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 CGNQ9P2M7 1197 aaKnown RBP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 SSX2IPQ9Y2D8 614 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 C2CD2Q9Y426 696 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 A0A0C4DFX4 3053 aa10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 SF3B1O75533 1304 aaKnown RBP eCLIP10.31□□□□□ -0.76
SDCCAG3-208ENST00000466579 EXTL3O43909 919 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 IL18RAPO95256 599 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 NRIP1P48552 1158 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 GLUD2P49448 558 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 AARSP49588 968 aaKnown RBP eCLIP10.3□□□□□ -0.764e-6■■■■■ 30.6
SDCCAG3-208ENST00000466579 ACOT2P49753 483 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 CLCNKBP51801 687 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 MRPS5P82675 430 aaKnown RBP10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 ELAVL2Q12926 359 aaKnown RBP10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 KNOP1Q1ED39 458 aaKnown RBP10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 USP41Q3LFD5 358 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 SPATA1Q5VX52 437 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 NT5DC4Q86YG4 428 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 BRSK2Q8IWQ3 736 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 C3orf58Q8NDZ4 430 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 ZSWIM2Q8NEG5 633 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 VN1R2Q8NFZ6 395 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 MICAL1Q8TDZ2 1067 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 MSLNLQ96KJ4 702 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 KCTD10Q9H3F6 313 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 GOLGA2P5Q9HBQ8 144 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 SLC39A2Q9NP94 309 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 AGPAT3Q9NRZ7 376 aa10.3□□□□□ -0.76
SDCCAG3-208ENST00000466579 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms