RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 RAB33AQ14088 237 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 UPP1Q16831 310 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 RTP3Q9BQQ7 232 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 TCHPQ9BT92 498 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 C17orf75Q9HAS0 396 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 PTPRHQ9HD43 1115 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 MTRRQ9UBK8 725 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 POLIQ9UNA4 740 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
COL9A3-206ENST00000466532 SFI1A8K8P3 1242 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 STK25O00506 426 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 SLC16A4O15374 487 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 CCL16O15467 120 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 TRAPPC3O43617 180 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 TKTP29401 623 aaKnown RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 HOXA9P31269 272 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 BRCC3P46736 316 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 NTHL1P78549 312 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 ATP2C1P98194 919 aaPredicted RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 SOX4Q06945 474 aaPredicted RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 HTR4Q13639 388 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 XKR4Q5GH76 650 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 AXDND1Q5T1B0 1012 aaPredicted RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 CD300LGQ6UXG3 332 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 ALKAL1Q6UXT8 129 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 C3orf58Q8NDZ4 430 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 ST13P5Q8NFI4 369 aaPredicted RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 SLC7A14Q8TBB6 771 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 TIPINQ9BVW5 301 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 CA14Q9ULX7 337 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 CDY1Q9Y6F8 540 aa21■□□□□ 0.95
COL9A3-206ENST00000466532 ZFP37Q9Y6Q3 630 aaPredicted RBP21■□□□□ 0.95
COL9A3-206ENST00000466532 MYO15AQ9UKN7 3530 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 KRBA1A5PL33 1030 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 ANHXE9PGG2 379 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 I3L4J1 428 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 XYLBO75191 536 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 MCF2P10911 925 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 HARSP12081 509 aaKnown RBP20.99■□□□□ 0.95
COL9A3-206ENST00000466532 RFX1P22670 979 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 PROZP22891 400 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 GUCY2CP25092 1073 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 GJB2P29033 226 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 RAD51AP2Q09MP3 1159 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 MPZL3Q6UWV2 235 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 RSPO2Q6UXX9 243 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-206ENST00000466532 DDX27Q96GQ7 796 aaKnown RBP20.99■□□□□ 0.95
COL9A3-206ENST00000466532 TMX3Q96JJ7 454 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 SNX27Q96L92 541 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 ACAP3Q96P50 834 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 PNMA5Q96PV4 448 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 SLC38A7Q9NVC3 462 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 BACE2Q9Y5Z0 518 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 NUMBLQ9Y6R0 609 aa20.99■□□□□ 0.95
COL9A3-206ENST00000466532 ANK1P16157 1881 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 VWA3AA6NCI4 1184 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 PROB1E7EW31 1015 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 H3BQV1 296 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 ABLIM1O14639 778 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 UVSSAQ2YD98 709 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 HYIQ5T013 277 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 ANKS3Q6ZW76 656 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 CCDC105Q8IYK2 499 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 GPR152Q8TDT2 470 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 ZMAT2Q96NC0 199 aaKnown RBP20.98■□□□□ 0.95
COL9A3-206ENST00000466532 PLIN2Q99541 437 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 NTPCRQ9BSD7 190 aaKnown RBP20.98■□□□□ 0.95
COL9A3-206ENST00000466532 CDH7Q9ULB5 785 aa20.98■□□□□ 0.95
COL9A3-206ENST00000466532 ZFHX2Q9C0A1 2572 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-206ENST00000466532 PODXLO00592 558 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 NBL1P41271 181 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 SMTNP53814 917 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 STRN3Q13033 797 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 SYT2Q8N9I0 419 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-206ENST00000466532 DTWD2Q8NBA8 298 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 SPIRE2Q8WWL2 714 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 CDK5RAP3Q96JB5 506 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 ZBTB45Q96K62 511 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-206ENST00000466532 KCNG1Q9UIX4 513 aa20.97■□□□□ 0.95
COL9A3-206ENST00000466532 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
COL9A3-206ENST00000466532 POU2F2P09086 479 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 PLS3P13797 630 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 KCNE1P15382 129 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 KCTD17Q8N5Z5 321 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 ITFG1Q8TB96 612 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 FGF13Q92913 245 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 FGF14Q92915 247 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 TBC1D17Q9HA65 648 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 HCFC1R1Q9NWW0 138 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 CNTN3Q9P232 1028 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 ANKFY1Q9P2R3 1169 aa20.96■□□□□ 0.95
COL9A3-206ENST00000466532 TOM1L1O75674 476 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 PLA2G4BP0C869 781 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 SLC12A3P55017 1021 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 NOLC1Q14978 699 aaKnown RBP eCLIP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 VARS2Q5ST30 1063 aaKnown RBP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 ARL6IP4Q66PJ3 421 aaKnown RBP20.95■□□□□ 0.94
COL9A3-206ENST00000466532 PARM1Q6UWI2 310 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 RTL10Q7L3V2 364 aa20.95■□□□□ 0.94
COL9A3-206ENST00000466532 TMEM161BQ8NDZ6 487 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms