RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 AGMOQ6ZNB7 445 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 CHST3Q7LGC8 479 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 LRRC56Q8IYG6 542 aaPredicted RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 ZNF444Q8N0Y2 327 aaPredicted RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 LCORLQ8N3X6 602 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 PPTC7Q8NI37 304 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 SSH1Q8WYL5 1049 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 PPP1R16BQ96T49 567 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 GPR20Q99678 358 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 API5Q9BZZ5 524 aaKnown RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 SMOC2Q9H3U7 446 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 POMKQ9H5K3 350 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 PRKRIP1Q9H875 184 aaPredicted RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 NGRNQ9NPE2 291 aaKnown RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 DUSP12Q9UNI6 340 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 SIT1Q9Y3P8 196 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 PCDHGA2Q9Y5H1 932 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 MRPL42Q9Y6G3 142 aaKnown RBP6.85□□□□□ -1.31
NCL-208ENST00000466274 USP24Q9UPU5 2620 aa6.85□□□□□ -1.31
NCL-208ENST00000466274 SCN5AQ14524 2016 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ZNF532Q9HCE3 1301 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 TMEM8BA6NDV4 472 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 HAS3O00219 553 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ENPP3O14638 875 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 FOXD2O60548 495 aaPredicted RBP6.84□□□□□ -1.31
NCL-208ENST00000466274 PPFIA4O75335 1185 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 EDNRBP24530 442 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 PMLP29590 882 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 KIR3DL1P43629 444 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 HK2P52789 917 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ARHGAP1Q07960 439 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 KCNA1Q09470 495 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 BMS1Q14692 1282 aaKnown RBP6.84□□□□□ -1.31
NCL-208ENST00000466274 LY6KQ17RY6 165 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ALDH1L2Q3SY69 923 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 CCDC184Q52MB2 194 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 SPECC1Q5M775 1068 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 RNF207Q6ZRF8 634 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 OTOP3Q7RTS5 596 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
NCL-208ENST00000466274 VN1R2Q8NFZ6 395 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 CCDC120Q96HB5 630 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 TMEM87BQ96K49 555 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 MEIS3Q99687 375 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 MTMR4Q9NYA4 1195 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 ARPP21Q9UBL0 812 aaPredicted RBP6.84□□□□□ -1.31
NCL-208ENST00000466274 RAB23Q9ULC3 237 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 COL11A1P12107 1806 aaPredicted RBP6.84□□□□□ -1.31
NCL-208ENST00000466274 GPR179Q6PRD1 2367 aa6.84□□□□□ -1.31
NCL-208ENST00000466274 MAP1BP46821 2468 aaKnown RBP6.84□□□□□ -1.32
NCL-208ENST00000466274 ZNFX1Q9P2E3 1918 aaKnown RBP6.84□□□□□ -1.32
NCL-208ENST00000466274 CEP250Q9BV73 2442 aa6.84□□□□□ -1.32
NCL-208ENST00000466274 TANC1Q9C0D5 1861 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 CYP2D7A0A087X1C5 515 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 ARIH2O95376 493 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 GNAI2P04899 355 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 CTSHP09668 335 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 LIG3P49916 1009 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 RBM10P98175 930 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 DDX10Q13206 875 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 KCNC3Q14003 757 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 IL31Q6EBC2 164 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 CTR9Q6PD62 1173 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 SEPT14Q6ZU15 432 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 RSPH3Q86UC2 560 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 CREG2Q8IUH2 290 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 THNSL1Q8IYQ7 743 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 FBXO15Q8NCQ5 510 aaPredicted RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 ABHD4Q8TB40 342 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 DUSP9Q99956 384 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 ADAMTS10Q9H324 1103 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 ARMT1Q9H993 441 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 ENTPD7Q9NQZ7 604 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 IGSF9Q9P2J2 1179 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 ANKFY1Q9P2R3 1169 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 DBNLQ9UJU6 430 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 FBXO4Q9UKT5 387 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 SMG5Q9UPR3 1016 aaKnown RBP6.83□□□□□ -1.32
NCL-208ENST00000466274 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
NCL-208ENST00000466274 LAMTOR5O43504 91 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 PRKAB2O43741 272 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 LRP3O75074 770 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 FGF18O76093 207 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 MBD4O95243 580 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 DCNP07585 359 aaKnown RBP6.82□□□□□ -1.32
NCL-208ENST00000466274 ZNF286BP0CG31 522 aa6.82□□□□□ -1.32
NCL-208ENST00000466274 RAC2P15153 192 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms