RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 UPP1Q16831 310 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 ZNF568Q3ZCX4 644 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 LIN9Q5TKA1 542 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 CEP57Q86XR8 500 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 SLC44A3Q8N4M1 653 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 RTP3Q9BQQ7 232 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 NTPCRQ9BSD7 190 aaKnown RBP13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 CCDC94Q9BW85 323 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 KMT5AQ9NQR1 393 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 KCNG1Q9UIX4 513 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 BACE2Q9Y5Z0 518 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 CITO14578 2027 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 DOCK6Q96HP0 2047 aa13.68□□□□□ -0.22
SOX2-OT-203ENST00000466034 ZFHX2Q9C0A1 2572 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 SMIM28A0A1B0GU29 152 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 H0Y858 1186 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 ADAM12O43184 909 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 TRAPPC3O43617 180 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 B3GAT3O94766 335 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 C8AP07357 584 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 MCF2P10911 925 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 SRFP11831 508 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 KCNE1P15382 129 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 CDC25AP30304 524 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 CLCNKBP51801 687 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 YARSP54577 528 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 HTR4Q13639 388 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 GLRA4Q5JXX5 417 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 PPM1LQ5SGD2 360 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 GET4Q7L5D6 327 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 CEP120Q8N960 986 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 FLCNQ8NFG4 579 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 RSAD2Q8WXG1 361 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 KCNN1Q92952 543 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 SNX27Q96L92 541 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 FBXL21Q9UKT6 434 aa13.67□□□□□ -0.22
SOX2-OT-203ENST00000466034 MYH11P35749 1972 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 SLC26A4O43511 780 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 XYLBO75191 536 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 FSHRP23945 695 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 IGFBP6P24592 240 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 OR1D2P34982 312 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 NBL1P41271 181 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 ARL6IP4Q66PJ3 421 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 ANKS3Q6ZW76 656 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 GRASPQ7Z6J2 395 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 SIX5Q8N196 739 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 SYT2Q8N9I0 419 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 C3orf58Q8NDZ4 430 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 PNMA5Q96PV4 448 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 GOLGA2P5Q9HBQ8 144 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 SLC2A4RGQ9NR83 387 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 KCND2Q9NZV8 630 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 CNTN3Q9P232 1028 aa13.66□□□□□ -0.22
SOX2-OT-203ENST00000466034 NOTCH4Q99466 2003 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 KRBA1A5PL33 1030 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 PI15O43692 258 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 GFRA3O60609 400 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 PLS3P13797 630 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 GJB2P29033 226 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 TKTP29401 623 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 SLC12A3P55017 1021 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 TMEM119Q4V9L6 283 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 MCTP1Q6DN14 999 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 RSPO2Q6UXX9 243 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 TMEM161BQ8NDZ6 487 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 ACAP3Q96P50 834 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 CDH7Q9ULB5 785 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 PDCD11Q14690 1871 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-203ENST00000466034 PODXLO00592 558 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 SYN3O14994 580 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 SLC16A4O15374 487 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 CCL16O15467 120 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 TBC1D4O60343 1298 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 TOM1L1O75674 476 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 CFHP08603 1231 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 RPL9P32969 192 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 BRCC3P46736 316 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 MCM2P49736 904 aa13.64□□□□□ -0.23
SOX2-OT-203ENST00000466034 SMTNP53814 917 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms