RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 A0A0U1RQF3 1178 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 NT5C1B-RDH14C9J2C7 533 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 MBTPS2O43462 519 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.75
ATG3-203ENST00000465980 SRGAP2CP0DJJ0 459 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 YWHABP31946 246 aaKnown RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 CA8P35219 290 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 PHKA2P46019 1235 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 UBE3AQ05086 875 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 SMAD4Q13485 552 aaKnown RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 GAS6Q14393 721 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 EMC2Q15006 297 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 XKR9Q5GH70 373 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 TMEM31Q5JXX7 168 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 HYIQ5T013 277 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 RRAGBQ5VZM2 374 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 LRSAM1Q6UWE0 723 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 FAM43BQ6ZT52 329 aaPredicted RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 ZNF410Q86VK4 478 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 TPH2Q8IWU9 490 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 CEP57L1Q8IYX8 460 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 SNX29Q8TEQ0 813 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 PSPC1Q8WXF1 523 aaKnown RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 DHX58Q96C10 678 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 CALML4Q96GE6 196 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 JPH2Q9BR39 696 aaPredicted RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 CUEDC2Q9H467 287 aa10.38□□□□□ -0.75
ATG3-203ENST00000465980 HOOK1Q9UJC3 728 aaKnown RBP10.38□□□□□ -0.75
ATG3-203ENST00000465980 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 A0A087WWV3 80 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 MEIS3P2A8K0S8 358 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 ZC3H11AO75152 810 aaKnown RBP eCLIP10.37□□□□□ -0.75
ATG3-203ENST00000465980 PPM1AP35813 382 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 STAT6P42226 847 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 LAMTOR4Q0VGL1 99 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 TMEM119Q4V9L6 283 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 LLGL2Q6P1M3 1020 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 ADHFE1Q8IWW8 467 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 VN1R2Q8NFZ6 395 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 PRPF31Q8WWY3 499 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 PAGE5Q96GU1 130 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 CCDC43Q96MW1 224 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 TCF25Q9BQ70 676 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 EIF2AK1Q9BQI3 630 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 APOL5Q9BWW9 433 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 DHX33Q9H6R0 707 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 ZSWIM4Q9H7M6 989 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 MINDY3Q9H8M7 445 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 IFT122Q9HBG6 1241 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 C11orf16Q9NQ32 467 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 CYLDQ9NQC7 956 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 ENAMQ9NRM1 1142 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 CUEDC1Q9NWM3 386 aaPredicted RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 SPG21Q9NZD8 308 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 CLEC1BQ9P126 229 aa10.37□□□□□ -0.75
ATG3-203ENST00000465980 PUF60Q9UHX1 559 aaKnown RBP10.37□□□□□ -0.75
ATG3-203ENST00000465980 PLXNA3P51805 1871 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 HIDE1A8MVS5 230 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 FSCN2O14926 492 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 EOMESO95936 686 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 PLCG1P19174 1290 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 RPA1P27694 616 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 CCT6AP40227 531 aaKnown RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 BCAR1P56945 870 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 CDC42EP1Q00587 391 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 KRT17Q04695 432 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 RNASELQ05823 741 aaKnown RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 POSTNQ15063 836 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 DUSP6Q16828 381 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 GLB1LQ6UWU2 654 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 OTUD6AQ7L8S5 288 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 TMC7Q7Z402 723 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 SMRP1Q8NCR6 262 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 CDK5RAP3Q96JB5 506 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 MSLNLQ96KJ4 702 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 POLR3CQ9BUI4 534 aaPredicted RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 MRPL9Q9BYD2 267 aaKnown RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 CHST12Q9NRB3 414 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 FAM105AQ9NUU6 356 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 PRKAG3Q9UGI9 489 aa10.36□□□□□ -0.75
ATG3-203ENST00000465980 USP15Q9Y4E8 981 aaPredicted RBP10.36□□□□□ -0.75
ATG3-203ENST00000465980 DOCK6Q96HP0 2047 aa10.35□□□□□ -0.75
ATG3-203ENST00000465980 PI4K2BG5E9Z4 385 aa10.35□□□□□ -0.75
ATG3-203ENST00000465980 MED24O75448 989 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms