RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CDY1Q9Y6F8 540 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 COL4A2P08572 1712 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 LILRB5O75023 590 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 RHOP08100 348 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 LIG1P18858 919 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
MCF2L-220ENST00000464800 LMNB2Q03252 620 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 DCAF4L1Q3SXM0 396 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 NELL1Q92832 810 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 PRMT8Q9NR22 394 aaPredicted RBP16.11■□□□□ 0.17
MCF2L-220ENST00000464800 HEBP1Q9NRV9 189 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
MCF2L-220ENST00000464800 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 GDAQ9Y2T3 454 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 TICRRQ7Z2Z1 1910 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 CACNA1BQ00975 2339 aa16.11■□□□□ 0.17
MCF2L-220ENST00000464800 PRR5-ARHGAP8B1AHC4 643 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 TRAPPC3O43617 180 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 B3GAT3O94766 335 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 CTDNEP1O95476 244 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 ARHGAP8P85298 464 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 SLC5A9Q2M3M2 681 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 GLRA4Q5JXX5 417 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 ANKS3Q6ZW76 656 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 BSNDQ8WZ55 320 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 DNASE1L2Q92874 299 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 MCRS1Q96EZ8 462 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
MCF2L-220ENST00000464800 UROC1Q96N76 676 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 CNTNAP3BQ96NU0 1288 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 MTMR9Q96QG7 549 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 FAM126AQ9BYI3 521 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-220ENST00000464800 CNTNAP3Q9BZ76 1288 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 TUFT1Q9NNX1 390 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 BACE2Q9Y5Z0 518 aa16.1■□□□□ 0.17
MCF2L-220ENST00000464800 ACKR2O00590 384 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 LRG1P02750 347 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 SPATA31C1P0DKV0 1188 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 CEBPBP17676 345 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 TKTP29401 623 aaKnown RBP16.09■□□□□ 0.17
MCF2L-220ENST00000464800 NAMPTP43490 491 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 CLCNKBP51801 687 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 ADCY1Q08828 1119 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 EEF1DP3Q658K8 133 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 ELSPBP1Q96BH3 223 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 PPP1R10Q96QC0 940 aaKnown RBP16.09■□□□□ 0.17
MCF2L-220ENST00000464800 PLA2G2FQ9BZM2 168 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-220ENST00000464800 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-220ENST00000464800 GMEB2Q9UKD1 530 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 USP18Q9UMW8 372 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 USP20Q9Y2K6 914 aa16.09■□□□□ 0.17
MCF2L-220ENST00000464800 WNT7AO00755 349 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 PRRG1O14668 218 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 TBC1D4O60343 1298 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 EDN1P05305 212 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 PTPN2P17706 415 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 IGFBP6P24592 240 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-220ENST00000464800 ATXN1P54253 815 aaKnown RBP16.08■□□□□ 0.16
MCF2L-220ENST00000464800 MTAPQ13126 283 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 PPP2R5AQ15172 486 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 UPP1Q16831 310 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 TANGO2Q6ICL3 276 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 APBB1IPQ7Z5R6 666 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-220ENST00000464800 CATSPER3Q86XQ3 398 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 NACC1Q96RE7 527 aa16.08■□□□□ 0.16
MCF2L-220ENST00000464800 NDRG2Q9UN36 371 aaKnown RBP16.08■□□□□ 0.16
MCF2L-220ENST00000464800 PDCD11Q14690 1871 aaKnown RBP16.08■□□□□ 0.16
MCF2L-220ENST00000464800 EPG5Q9HCE0 2579 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ARHGEF35A5YM69 484 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 BTBD18B2RXH4 712 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 I3L4J1 428 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 MED24O75448 989 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ELF1P32519 619 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 EFNA5P52803 228 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ROR1Q01973 937 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 GRM2Q14416 872 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 PPP2R5DQ14738 602 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ATF7IP2Q5U623 682 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 DIS3L2Q8IYB7 885 aaKnown RBP16.07■□□□□ 0.16
MCF2L-220ENST00000464800 C3orf58Q8NDZ4 430 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ZNF461Q8TAF7 563 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 RTKNQ9BST9 563 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-220ENST00000464800 BRD9Q9H8M2 597 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 GOLGA2P5Q9HBQ8 144 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 CITO14578 2027 aa16.07■□□□□ 0.16
MCF2L-220ENST00000464800 SHISA7A6NL88 538 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 MAN2B1O00754 1011 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 CYP11B2P19099 503 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 FCARP24071 287 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 BRCC3P46736 316 aa16.06■□□□□ 0.16
MCF2L-220ENST00000464800 NRLP54845 237 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms