RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TTC28Q96AY4 2481 aa4.4□□□□□ -1.7
SCFD1-204ENST00000463622 TRBV23-1A0A0A0MS06 115 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 TCP10L2B9ZVM9 353 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 CXCL11O14625 94 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 KCNK3O14649 394 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 TAF5LO75529 589 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 KCNJ4P48050 445 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 RBM5P52756 815 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ATP8B2P98198 1209 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 PUM1Q14671 1186 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 LRRC24Q50LG9 513 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 CD276Q5ZPR3 534 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 DBX2Q6ZNG2 339 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF804AQ7Z570 1209 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 MTDHQ86UE4 582 aaKnown RBP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 KBTBD2Q8IY47 623 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.4□□□□□ -1.712e-17■■■■□ 19.6
SCFD1-204ENST00000463622 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 SSH3Q8TE77 659 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 EXOC2Q96KP1 924 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 WRNIP1Q96S55 665 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 GPR20Q99678 358 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ZFYVE21Q9BQ24 234 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ALG1Q9BT22 464 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 SSBP3Q9BWW4 388 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 PPP4R1LQ9P1A2 415 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ZFP69BQ9UJL9 534 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 ZMYND8Q9ULU4 1186 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-204ENST00000463622 EXOC6BQ9Y2D4 811 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 PCDHA9Q9Y5H5 950 aa4.4□□□□□ -1.71
SCFD1-204ENST00000463622 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 FAM221BA6H8Z2 402 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 GNAI3P08754 354 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 PYGMP11217 842 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 ADAM17P78536 824 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 MTX1Q13505 466 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 RASGRF1Q13972 1273 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 ZXDCQ2QGD7 858 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 MFSD14BQ5SR56 506 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 APOBEC3HQ6NTF7 200 aaKnown RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 KCTD1Q719H9 257 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 OSTM1Q86WC4 334 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 SCUBE1Q8IWY4 988 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 DIS3LQ8TF46 1054 aaKnown RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 HOOK2Q96ED9 719 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 FAM84BQ96KN1 310 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 PARK7Q99497 189 aaKnown RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 TACO1Q9BSH4 297 aaKnown RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 CHMP4AQ9BY43 222 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 SIL1Q9H173 461 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 SLC39A2Q9NP94 309 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 DLL4Q9NR61 685 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 ARHGAP20Q9P2F6 1191 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 OGDHLQ9ULD0 1010 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 LAMA2P24043 3122 aaKnown RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 PRUNE2Q8WUY3 3088 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF646O15015 1829 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-204ENST00000463622 PSME4Q14997 1843 aa4.39□□□□□ -1.71
SCFD1-204ENST00000463622 LAMTOR5O43504 91 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 IL18BPO95998 194 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 C6orf222P0C671 652 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 KRT15P19012 456 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 GUCY1A3Q02108 690 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 NFATC3Q12968 1075 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 UBE4AQ14139 1066 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 TSHZ3Q63HK5 1081 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 ARHGAP36Q6ZRI8 547 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 ATG9AQ7Z3C6 839 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 GPR155Q7Z3F1 870 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 PCDH19Q8TAB3 1148 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 ZNF341Q9BYN7 854 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 JADE2Q9NQC1 790 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CATSPERZQ9NTU4 200 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 HSPBP1Q9NZL4 362 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 GJD2Q9UKL4 321 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 SPEF2Q9C093 1822 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 LAMB1P07942 1786 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 ANKRD18BA2A2Z9 1011 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 FAM90A27PA6NNH2 459 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CYP7B1O75881 506 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 KLHL18O94889 574 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 FBXO21O94952 628 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 HIBADHP31937 336 aaKnown RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 PAK1Q13153 545 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 BTBD8Q5XKL5 378 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 MIGA2Q7L4E1 593 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 FASTKD5Q7L8L6 764 aaKnown RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 PTRH1Q86Y79 214 aaKnown RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 RPAP2Q8IXW5 612 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-204ENST00000463622 SMC5Q8IY18 1101 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 PTPRN2Q92932 1015 aa4.38□□□□□ -1.71
SCFD1-204ENST00000463622 CCDC136Q96JN2 1154 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms