RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 SAAL1Q96ER3 474 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 KIF12Q96FN5 646 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 BORCS6Q96GS4 357 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 ZNF668Q96K58 619 aaPredicted RBP8□□□□□ -1.13
EPHA4-210ENST00000463446 ZBTB45Q96K62 511 aaPredicted RBP8□□□□□ -1.13
EPHA4-210ENST00000463446 ZNF560Q96MR9 790 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 CGRRF1Q99675 332 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 FGFBP2Q9BYJ0 223 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 VPS16Q9H269 839 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 AGO3Q9H9G7 860 aaKnown RBP8□□□□□ -1.13
EPHA4-210ENST00000463446 PLCB1Q9NQ66 1216 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 INTS13Q9NVM9 706 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 RAB20Q9NX57 234 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 SNTG2Q9NY99 539 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 IFNKQ9P0W0 207 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 CNTN3Q9P232 1028 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 SSX2IPQ9Y2D8 614 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 USP20Q9Y2K6 914 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 RWDD3Q9Y3V2 267 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 ITIH6Q6UXX5 1313 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 EVPLQ92817 2033 aa8□□□□□ -1.13
EPHA4-210ENST00000463446 ARID2Q68CP9 1835 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 SMIM28A0A1B0GU29 152 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 A0A1W2PQJ5 194 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 GOLGA8IPA6NC78 632 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 GOLGA8JA6NMD2 632 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 LACTBL1A8MY62 500 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 ABLIM1O14639 778 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 INPPL1O15357 1258 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 NBNO60934 754 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 STAU1O95793 577 aaKnown RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 HARSP12081 509 aaKnown RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 ALDH7A1P49419 539 aaKnown RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 MXI1P50539 228 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 SNX16P57768 344 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 OSTNP61366 133 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TFAMQ00059 246 aaKnown RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 CCDC173Q0VFZ6 552 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 GRIK3Q13003 919 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 SLC10A6Q3KNW5 377 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 NOMO2Q5JPE7 1267 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 PPP1R2P3Q6NXS1 205 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 SLC39A4Q6P5W5 647 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 PDXDC1Q6P996 788 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 DCLRE1AQ6PJP8 1040 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 CRELD2Q6UXH1 353 aaPredicted RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 DEFB128Q7Z7B8 93 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 IRF2BP1Q8IU81 584 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 CBWD2Q8IUF1 395 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TXLNBQ8N3L3 684 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 LRRC52Q8N7C0 313 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TOP1MTQ969P6 601 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 ZBTB10Q96DT7 871 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 COLEC11Q9BWP8 271 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TMEM117Q9H0C3 514 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 MMRN2Q9H8L6 949 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 DPP3Q9NY33 737 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 DSEQ9UL01 958 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 KIAA1257Q9ULG3 409 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 LUC7L2Q9Y383 392 aaKnown RBP7.99□□□□□ -1.13
EPHA4-210ENST00000463446 INSL6Q9Y581 213 aa7.99□□□□□ -1.13
EPHA4-210ENST00000463446 TRIM43BA6NCK2 446 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 ARL5CA6NH57 179 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 ADCY5O95622 1261 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 C4BPAP04003 597 aaKnown RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 CSF2RAP15509 400 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 FGFR4P22455 802 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 CASP4P49662 377 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 MYL7Q01449 175 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 TUSC3Q13454 348 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 ZBTB6Q15916 424 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 ENOX2Q16206 610 aaKnown RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 ZACNQ401N2 412 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 SV2CQ496J9 727 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 UBXN11Q5T124 520 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 SV2AQ7L0J3 742 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 TRAPPC11Q7Z392 1133 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 VPS36Q86VN1 386 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 METTL23Q86XA0 190 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 OR8K1Q8NGG5 319 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 SYN2Q92777 582 aaPredicted RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 TRIM43Q96BQ3 446 aaPredicted RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 NT5C1BQ96P26 610 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 MED15Q96RN5 788 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 TMEM175Q9BSA9 504 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 NAA15Q9BXJ9 866 aaKnown RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 XPO4Q9C0E2 1151 aaKnown RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 VRTNQ9H8Y1 702 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 PDE11AQ9HCR9 933 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 LUC7LQ9NQ29 371 aaKnown RBP7.98□□□□□ -1.13
EPHA4-210ENST00000463446 SLC4A7Q9Y6M7 1214 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 UMODL1Q5DID0 1318 aa7.98□□□□□ -1.13
EPHA4-210ENST00000463446 FAM189A1O60320 539 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms