RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 WDR49Q8IV35 697 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 OR5B17Q8NGF7 314 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 FAM84AQ96KN4 292 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 PPP1R10Q96QC0 940 aaKnown RBP15.05■□□□□ -0
PHACTR4-203ENST00000463428 INTS13Q9NVM9 706 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 C2CD2Q9Y426 696 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 GOLGA6L19H0YKK7 550 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 HOXA2O43364 376 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 GJB5O95377 273 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 C4BPAP04003 597 aaKnown RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 TRIM49P0CI25 452 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 TRIM49CP0CI26 452 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 SCNN1GP51170 649 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 HTRA4P83105 476 aaPredicted RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 MLLT1Q03111 559 aaPredicted RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 KRT31Q15323 416 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 NOMO2Q5JPE7 1267 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 MIIPQ5JXC2 388 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 GLRA4Q5JXX5 417 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 LMBRD2Q68DH5 695 aaPredicted RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 SCARA3Q6AZY7 606 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 GLB1LQ6UWU2 654 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 C15orf39Q6ZRI6 1047 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 NT5DC4Q86YG4 428 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 TMEM130Q8N3G9 435 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 CXorf38Q8TB03 319 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 RSPH1Q8WYR4 309 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 FNBP1Q96RU3 617 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 SLC9A7Q96T83 725 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 TUBGCP2Q9BSJ2 902 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 UBE2OQ9C0C9 1292 aaKnown RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 MAGEC2Q9UBF1 373 aaPredicted RBP15.04■□□□□ -0
PHACTR4-203ENST00000463428 SLC4A7Q9Y6M7 1214 aa15.04■□□□□ -0
PHACTR4-203ENST00000463428 POMCP01189 267 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 THP07101 528 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
PHACTR4-203ENST00000463428 MTIF2P46199 727 aaKnown RBP15.03■□□□□ -0
PHACTR4-203ENST00000463428 SOX4Q06945 474 aaPredicted RBP15.03■□□□□ -0
PHACTR4-203ENST00000463428 KCNH2Q12809 1159 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 TMEM132DQ14C87 1099 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 MAN2A1Q16706 1144 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 CREBRFQ8IUR6 639 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 HERC6Q8IVU3 1022 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 KIF12Q96FN5 646 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 RPS6KC1Q96S38 1066 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 MTIF3Q9H2K0 278 aaKnown RBP15.03■□□□□ -0
PHACTR4-203ENST00000463428 PRO3102Q9H379 93 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 TBC1D13Q9NVG8 400 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 INPP5FQ9Y2H2 1132 aa15.03■□□□□ -0
PHACTR4-203ENST00000463428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.03■□□□□ -0
PHACTR4-203ENST00000463428 PMM2O15305 246 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 B4GALT3O60512 393 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 DDHD2O94830 711 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 TNNI1P19237 187 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 CYP3A5P20815 502 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 CDK11BP21127 795 aaKnown RBP15.02■□□□□ -0
PHACTR4-203ENST00000463428 GTF2H1P32780 548 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
PHACTR4-203ENST00000463428 TPM4P67936 248 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 DSC1Q08554 894 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 GRIK3Q13003 919 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 DUOXA2Q1HG44 320 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 ZACNQ401N2 412 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 CBWD6Q4V339 395 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 DCAF17Q5H9S7 520 aaPredicted RBP15.02■□□□□ -0
PHACTR4-203ENST00000463428 CBWD3Q5JTY5 395 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 CBWD5Q5RIA9 395 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 TCERG1LQ5VWI1 586 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 FAM117BQ6P1L5 589 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 SV2AQ7L0J3 742 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 USP37Q86T82 979 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 ZNF280BQ86YH2 543 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 C18orf25Q96B23 403 aaPredicted RBP15.02■□□□□ -0
PHACTR4-203ENST00000463428 TAB2Q9NYJ8 693 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 KANSL3Q9P2N6 904 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 TUBGCP4Q9UGJ1 667 aa15.02■□□□□ -0
PHACTR4-203ENST00000463428 UBQLN1Q9UMX0 589 aaKnown RBP15.02■□□□□ -0
PHACTR4-203ENST00000463428 SCN1AP35498 2009 aa15.02□□□□□ -0.01
PHACTR4-203ENST00000463428 GBF1Q92538 1859 aa15.02□□□□□ -0.01
PHACTR4-203ENST00000463428 TBKBP1A7MCY6 615 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 AP5Z1O43299 807 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 ATP2A2P16615 1042 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 GCLMP48507 274 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 FMO5P49326 533 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 AP3M2P53677 418 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 TFAMQ00059 246 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 FANCCQ00597 558 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 VWA3BQ502W6 1294 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 TRAPPC11Q7Z392 1133 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 CMTR2Q8IYT2 770 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 ABI1Q8IZP0 508 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 C1orf127Q8N9H9 656 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 URGCPQ8TCY9 931 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 CACTINQ8WUQ7 758 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 RNPC3Q96LT9 517 aaKnown RBP15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 MTMR12Q9C0I1 747 aa15.01□□□□□ -0.01
PHACTR4-203ENST00000463428 VPS16Q9H269 839 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms