RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PTENP60484 403 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 MCL1Q07820 350 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 MTMR12Q9C0I1 747 aa13.78□□□□□ -0.2
VAPB-203ENST00000463370 ZHX1Q9UKY1 873 aaPredicted RBP13.78□□□□□ -0.2
VAPB-203ENST00000463370 PLXNB2O15031 1838 aa13.77□□□□□ -0.2
VAPB-203ENST00000463370 RTN2O75298 545 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 VTNP04004 478 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 CFHP08603 1231 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
VAPB-203ENST00000463370 WDR44Q5JSH3 913 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 TSHZ1Q6ZSZ6 1077 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 LINC01465Q8N7H1 131 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
VAPB-203ENST00000463370 HES6Q96HZ4 224 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
VAPB-203ENST00000463370 L1RE1Q9UN81 338 aa13.77□□□□□ -0.21
VAPB-203ENST00000463370 TARSL2A2RTX5 802 aaKnown RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 ACKR2O00590 384 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 OGTO15294 1046 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 ACVR2BQ13705 512 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 NCOA4Q13772 614 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 CPNE8Q86YQ8 564 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 TAF4BQ92750 862 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 LENG1Q96BZ8 264 aaPredicted RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 CTTNBP2NLQ9P2B4 639 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 A0A087WZ62 844 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 CEP104O60308 925 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 NOP14P78316 857 aaKnown RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 GPC5P78333 572 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 CUL2Q13617 745 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 ZNF568Q3ZCX4 644 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 DCAF12L1Q5VU92 463 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 EXOC8Q8IYI6 725 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 KRT222Q8N1A0 295 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 LMBR1Q8WVP7 490 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 BTBD6Q96KE9 485 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 GDAP1L1Q96MZ0 367 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 JPH2Q9BR39 696 aaPredicted RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 FDXACB1Q9BRP7 624 aaPredicted RBP13.76□□□□□ -0.21
VAPB-203ENST00000463370 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
VAPB-203ENST00000463370 H3BRB1 525 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 DDX3YO15523 660 aaKnown RBP13.75□□□□□ -0.21
VAPB-203ENST00000463370 MEFVO15553 781 aaPredicted RBP13.75□□□□□ -0.21
VAPB-203ENST00000463370 MMP3P08254 477 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 HOXC6P09630 235 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 GZMAP12544 262 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 AMHR2Q16671 573 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 MARCH8Q5T0T0 291 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 EFCAB13Q8IY85 973 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 SYCE1Q8N0S2 351 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 CDT1Q9H211 546 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 TUT1Q9H6E5 874 aaKnown RBP13.75□□□□□ -0.21
VAPB-203ENST00000463370 AKT3Q9Y243 479 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 ZSCAN5CA6NGD5 496 aaPredicted RBP13.75□□□□□ -0.21
VAPB-203ENST00000463370 GPR25O00155 361 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 MAP2K7O14733 419 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 PHACTR2O75167 634 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 CLSTN1O94985 981 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 CLTAP09496 248 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 MAPK4P31152 587 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 TFDP1Q14186 410 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 LLGL2Q6P1M3 1020 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 RNF14Q9UBS8 474 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 AMFRQ9UKV5 643 aa13.75□□□□□ -0.21
VAPB-203ENST00000463370 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 TMEM110-MUSTN1A8MSY1 372 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ERLIN1O75477 346 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 MARCKSL1P49006 195 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 MYL6P60660 151 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 MTHFD1LQ6UB35 978 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CCNI2Q6ZMN8 369 aaPredicted RBP13.74□□□□□ -0.21
VAPB-203ENST00000463370 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 WDR49Q8IV35 697 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CPA5Q8WXQ8 436 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ALG3Q92685 438 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 KRT12Q99456 494 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ABHD16BQ9H3Z7 469 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms