RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 KRBA1A5PL33 1030 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 SLC16A4O15374 487 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 TRAPPC3O43617 180 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 XYLBO75191 536 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 PAPLNO95428 1278 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 HNRNPA1P09651 372 aaKnown RBP eCLIP26.39■■□□□ 1.82
TTC3-212ENST00000463216 FGFR3P22607 806 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 PRPHP41219 470 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 UPP1Q16831 310 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 GPR152Q8TDT2 470 aa26.39■■□□□ 1.82
TTC3-212ENST00000463216 MMTAG2Q9BU76 263 aaKnown RBP26.39■■□□□ 1.82
TTC3-212ENST00000463216 H3BQV1 296 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 TMEM189-UBE2V1I3L0A0 370 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 SOX4Q06945 474 aaPredicted RBP26.38■■□□□ 1.81
TTC3-212ENST00000463216 RABEP1Q15276 862 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 C1orf186Q6ZWK4 172 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 TAS1R3Q7RTX0 852 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 C3orf58Q8NDZ4 430 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 ARHGAP28Q9P2N2 729 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 MTRRQ9UBK8 725 aa26.38■■□□□ 1.81
TTC3-212ENST00000463216 RBM19Q9Y4C8 960 aaKnown RBP26.38■■□□□ 1.81
TTC3-212ENST00000463216 MYH11P35749 1972 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 HTR4Q13639 388 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 RAB33AQ14088 237 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 RILPL1Q5EBL4 403 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 RSPO2Q6UXX9 243 aaPredicted RBP26.37■■□□□ 1.81
TTC3-212ENST00000463216 ACAP3Q96P50 834 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 ANKFY1Q9P2R3 1169 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 CDH7Q9ULB5 785 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 MYO15AQ9UKN7 3530 aa26.37■■□□□ 1.81
TTC3-212ENST00000463216 ZFHX2Q9C0A1 2572 aaPredicted RBP26.37■■□□□ 1.81
TTC3-212ENST00000463216 VWA3AA6NCI4 1184 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 PODXLO00592 558 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
TTC3-212ENST00000463216 STRN3Q13033 797 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 MAPK7Q13164 816 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 PARM1Q6UWI2 310 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 MPZL3Q6UWV2 235 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 CD300LGQ6UXG3 332 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 ANKS3Q6ZW76 656 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 FRMD5Q7Z6J6 570 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 CCDC105Q8IYK2 499 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 DTWD2Q8NBA8 298 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 DDX27Q96GQ7 796 aaKnown RBP26.36■■□□□ 1.81
TTC3-212ENST00000463216 CDK5RAP3Q96JB5 506 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 ZBTB45Q96K62 511 aaPredicted RBP26.36■■□□□ 1.81
TTC3-212ENST00000463216 RPP25Q9BUL9 199 aaKnown RBP26.36■■□□□ 1.81
TTC3-212ENST00000463216 TBC1D17Q9HA65 648 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 PTPRHQ9HD43 1115 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 SLC38A7Q9NVC3 462 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 HCFC1R1Q9NWW0 138 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 DAXXQ9UER7 740 aaPredicted RBP26.36■■□□□ 1.81
TTC3-212ENST00000463216 CITO14578 2027 aa26.36■■□□□ 1.81
TTC3-212ENST00000463216 ANHXE9PGG2 379 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 MCF2P10911 925 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 GJB2P29033 226 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 HOXA9P31269 272 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 MATR3P43243 847 aaKnown RBP eCLIP26.35■■□□□ 1.817e-7■■■□□ 17
TTC3-212ENST00000463216 ARPP19P56211 112 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ANGPT1Q15389 498 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 SPECC1Q5M775 1068 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ALKAL1Q6UXT8 129 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ASCL5Q7RTU5 278 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ITFG1Q8TB96 612 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 FGF13Q92913 245 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 FGF14Q92915 247 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 SNX27Q96L92 541 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ZMAT2Q96NC0 199 aaKnown RBP26.35■■□□□ 1.81
TTC3-212ENST00000463216 C17orf75Q9HAS0 396 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 NUB1Q9Y5A7 615 aa26.35■■□□□ 1.81
TTC3-212ENST00000463216 ZFP37Q9Y6Q3 630 aaPredicted RBP26.35■■□□□ 1.81
TTC3-212ENST00000463216 NBL1P41271 181 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 SMTNP53814 917 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 ATP2C1P98194 919 aaPredicted RBP26.34■■□□□ 1.81
TTC3-212ENST00000463216 CACNB1Q02641 598 aaPredicted RBP26.34■■□□□ 1.81
TTC3-212ENST00000463216 UVSSAQ2YD98 709 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 SEZ6Q53EL9 994 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 ING5Q8WYH8 240 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 C18orf25Q96B23 403 aaPredicted RBP26.34■■□□□ 1.81
TTC3-212ENST00000463216 TMX3Q96JJ7 454 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 PNMA5Q96PV4 448 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 TIPINQ9BVW5 301 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 ARHGEF3Q9NR81 526 aa26.34■■□□□ 1.81
TTC3-212ENST00000463216 PROB1E7EW31 1015 aa26.33■■□□□ 1.81
TTC3-212ENST00000463216 GUCY2CP25092 1073 aa26.33■■□□□ 1.81
TTC3-212ENST00000463216 ELF1P32519 619 aa26.33■■□□□ 1.81
TTC3-212ENST00000463216 PABPC1LQ4VXU2 614 aaKnown RBP26.33■■□□□ 1.81
TTC3-212ENST00000463216 DNMT3BQ9UBC3 853 aaKnown RBP26.33■■□□□ 1.81
TTC3-212ENST00000463216 BACE2Q9Y5Z0 518 aa26.33■■□□□ 1.81
TTC3-212ENST00000463216 MYH15Q9Y2K3 1946 aa26.33■■□□□ 1.81
TTC3-212ENST00000463216 NPHP3-ACAD11A0A0J9YXS1 232 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 DCNP07585 359 aaKnown RBP26.32■■□□□ 1.8
TTC3-212ENST00000463216 PLS3P13797 630 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 PROZP22891 400 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 GPC5P78333 572 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 XKR4Q5GH76 650 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 VARS2Q5ST30 1063 aaKnown RBP26.32■■□□□ 1.8
TTC3-212ENST00000463216 MTSS1LQ765P7 747 aa26.32■■□□□ 1.8
TTC3-212ENST00000463216 PLA2G4BP0C869 781 aa26.31■■□□□ 1.8
TTC3-212ENST00000463216 NOLC1Q14978 699 aaKnown RBP eCLIP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms