RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 USP37Q86T82 979 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 NT5DC4Q86YG4 428 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 HACE1Q8IYU2 909 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 BADQ92934 168 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 LPPQ93052 612 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 APOL6Q9BWW8 343 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 UBN1Q9NPG3 1134 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 TMEM161AQ9NX61 479 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 MIOSQ9NXC5 875 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 PARP2Q9UGN5 583 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 SIK3Q9Y2K2 1263 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 MICAL3Q7RTP6 2002 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 A0A1W2PQC6 194 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 ARL5CA6NH57 179 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 OFD1O75665 1012 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 VNN1O95497 513 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 NFICP08651 508 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 AFF1P51825 1210 aaKnown RBP15.53■□□□□ 0.08
COL6A1-202ENST00000463060 EPHB4P54760 987 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 NAB2Q15742 525 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 EPC2Q52LR7 807 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
COL6A1-202ENST00000463060 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-202ENST00000463060 KRT39Q6A163 491 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 KLK14Q9P0G3 267 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 PRKAG2Q9UGJ0 569 aa15.53■□□□□ 0.08
COL6A1-202ENST00000463060 PDCD11Q14690 1871 aaKnown RBP15.52■□□□□ 0.08
COL6A1-202ENST00000463060 TPM2P07951 284 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 ACRP10323 421 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 TNNI1P19237 187 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 CDC25BP30305 580 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 UBXN1Q04323 297 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 FPGSQ05932 587 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.085e-7■■■■■ 28.6
COL6A1-202ENST00000463060 CLLU1OSQ5K130 101 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL6A1-202ENST00000463060 TRAPPC11Q7Z392 1133 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 PPP1R10Q96QC0 940 aaKnown RBP15.52■□□□□ 0.08
COL6A1-202ENST00000463060 GAD1Q99259 594 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 RSAD1Q9HA92 442 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
COL6A1-202ENST00000463060 EFCAB14O75071 495 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
COL6A1-202ENST00000463060 LRRN2O75325 713 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 CST3P01034 146 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-202ENST00000463060 SYN1P17600 705 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 MXI1P50539 228 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 TMEM132DQ14C87 1099 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 TMEM240Q5SV17 173 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 FKBP15Q5T1M5 1219 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 VSTM4Q8IW00 320 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 C1orf127Q8N9H9 656 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 EHBP1Q8NDI1 1231 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 TAS1R2Q8TE23 839 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 DPF3Q92784 378 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 SEMA4DQ92854 862 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 SIX4Q9UIU6 781 aa15.51■□□□□ 0.07
COL6A1-202ENST00000463060 BAIAP3O94812 1187 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 FGBP02675 491 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 SLC9A1P19634 815 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 CYP3A5P20815 502 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 PON1P27169 355 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 MLH1P40692 756 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 TFAMQ00059 246 aaKnown RBP15.5■□□□□ 0.07
COL6A1-202ENST00000463060 MYL7Q01449 175 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 SOX4Q06945 474 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-202ENST00000463060 SYCP1Q15431 976 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 GBP6Q6ZN66 633 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 ZNF365Q70YC5 407 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 NPAS4Q8IUM7 802 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 TMEM130Q8N3G9 435 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 FBXL13Q8NEE6 735 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 CACTINQ8WUQ7 758 aaKnown RBP15.5■□□□□ 0.07
COL6A1-202ENST00000463060 TOP1MTQ969P6 601 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 C18orf25Q96B23 403 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-202ENST00000463060 PDLIM2Q96JY6 352 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 MTMR12Q9C0I1 747 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 SIX2Q9NPC8 291 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 PLCB1Q9NQ66 1216 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 ZMYND8Q9ULU4 1186 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-202ENST00000463060 PCDHB7Q9Y5E2 793 aa15.5■□□□□ 0.07
COL6A1-202ENST00000463060 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 ANO9A1A5B4 782 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 PES1O00541 588 aaKnown RBP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 NOL4O94818 638 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 HLA-DRAP01903 254 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 TPM3P06753 285 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 FGFR1P11362 822 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 KLK7P49862 253 aa15.49■□□□□ 0.07
COL6A1-202ENST00000463060 WDR5P61964 334 aaKnown RBP15.49■□□□□ 0.07
COL6A1-202ENST00000463060 TBX2Q13207 712 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms