RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ADI1Q9BV57 179 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 LMBRD1Q9NUN5 540 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 TRPS1Q9UHF7 1281 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CA14Q9ULX7 337 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 RPTORQ8N122 1335 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 A0A087WWL8 130 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CCDC196A0A1B0GTZ2 297 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 ZNF839A8K0R7 811 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 F2RL2O00254 374 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 PIK3R2O00459 728 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 NRP2O60462 931 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 MT-ND5P03915 603 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 RPLP2P05387 115 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 LTA4HP09960 611 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 NPPBP16860 134 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 KLRC1P26715 233 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 SLC7A1P30825 629 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 UBE3CQ15386 1083 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 BORAQ6PGQ7 559 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 DCP2Q8IU60 420 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 UNC5BQ8IZJ1 945 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 GAB3Q8WWW8 586 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 TSPAN17Q96FV3 270 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 C7orf69Q9H7B7 122 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 BCO1Q9HAY6 547 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 PIH1D1Q9NWS0 290 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 SCAF8Q9UPN6 1271 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 GAS2O43903 313 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 SOAT2O75908 522 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 POLBP06746 335 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 ATXN1P54253 815 aaKnown RBP3.53□□□□□ -1.84
SMC4-203ENST00000462668 TOMM20Q15388 145 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 FRMD5Q7Z6J6 570 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 ANKS4BQ8N8V4 417 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 IL17RDQ8NFM7 739 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 SLC22A17Q8WUG5 538 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 CNPPD1Q9BV87 410 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 ZNF518BQ9C0D4 1074 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 PREBQ9HCU5 417 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 RLIMQ9NVW2 624 aa3.53□□□□□ -1.84
SMC4-203ENST00000462668 GNAT3A8MTJ3 354 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 TOR1BO14657 336 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GFPT2O94808 682 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 MATN4O95460 622 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GLP2RO95838 553 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PPARAQ07869 468 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CD276Q5ZPR3 534 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 BEND5Q7L4P6 421 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 FAM126BQ8IXS8 530 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GHITMQ9H3K2 345 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ELAC1Q9H777 363 aaKnown RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 XPNPEP3Q9NQH7 507 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 RIMBP3CA6NJZ7 1639 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 RIMBP3BA6NNM3 1639 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 RIMBP3Q9UFD9 1639 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 A0A1W2PPL8 197 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PRR19A6NJB7 356 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PHF2O75151 1096 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ZBTB7AO95365 584 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PGM3O95394 542 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 F13BP05160 661 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CSF1P09603 554 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 NR2F1P10589 423 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CKBP12277 381 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PTGS1P23219 599 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 FAM205BPQ63HN1 556 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 GALNT18Q6P9A2 607 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 FAM43BQ6ZT52 329 aaPredicted RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 ZNF765Q7L2R6 523 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ZGPATQ8N5A5 531 aaKnown RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 OR5AN1Q8NGI8 311 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ZSCAN31Q96LW9 406 aaPredicted RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 GPR35Q9HC97 309 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 G6PC2Q9NQR9 355 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ZSWIM5Q9P217 1185 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 IFT80Q9P2H3 777 aaPredicted RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 OGDHLQ9ULD0 1010 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 MAN2B2Q9Y2E5 1009 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PRAMEF22A3QJZ6 481 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 COL8A1P27658 744 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 SLC5A2P31639 672 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 ADAM8P78325 824 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CDK17Q00537 523 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 KIF22Q14807 665 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CR1LQ2VPA4 569 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 SLC45A4Q5BKX6 768 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 TTC22Q5TAA0 569 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 SLC9C2Q5TAH2 1124 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 KLHDC7AQ5VTJ3 777 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 PRAMEF18Q5VWM3 479 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 RBM12BQ8IXT5 1001 aaKnown RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 ARRDC4Q8NCT1 418 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 OR10A5Q9H207 317 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 CHST8Q9H2A9 424 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 DTLQ9NZJ0 730 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 HERC5Q9UII4 1024 aaKnown RBP3.52□□□□□ -1.85
SMC4-203ENST00000462668 PGPEP1LA6NFU8 196 aa3.52□□□□□ -1.85
SMC4-203ENST00000462668 LY86O95711 162 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms