RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PCSK9Q8NBP7 692 aaKnown RBP16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 CXCL16Q9H2A7 254 aa16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 RPF1Q9H9Y2 349 aaKnown RBP16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 APOBEC3GQ9HC16 384 aaKnown RBP16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
RPRD1B-203ENST00000462548 A0A087X0T9 212 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 GOLGA6L9A6NEM1 432 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 FAM228BP0C875 321 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 DHX38Q92620 1227 aaKnown RBP16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 CELF4Q9BZC1 486 aaKnown RBP16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 UMODL1Q5DID0 1318 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 B4GALT4O60513 344 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 NFICP08651 508 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 KRT83P78385 493 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 MRPS6P82932 125 aaKnown RBP16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 TRAPPC11Q7Z392 1133 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 ARID3AQ99856 593 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 ADAMTS1Q9UHI8 967 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 CDY2AQ9Y6F7 541 aa16.18■□□□□ 0.18
RPRD1B-203ENST00000462548 ETF1P62495 437 aaKnown RBP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 TFAMQ00059 246 aaKnown RBP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 NCOA4Q13772 614 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 SURF1Q15526 300 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 SHC3Q92529 594 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 OSBPL7Q9BZF2 842 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 NOC2LQ9Y3T9 749 aaKnown RBP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 CHRNA1P02708 482 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 CTSHP09668 335 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 MFAP3P55082 362 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 ITGA7Q13683 1181 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 DUOXA2Q1HG44 320 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 JADE1Q6IE81 842 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 DNAAF5Q86Y56 855 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 LNX1Q8TBB1 728 aaPredicted RBP16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 WDR24Q96S15 920 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 ADPGKQ9BRR6 497 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 ACP6Q9NPH0 428 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 HES2Q9Y543 173 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 NUB1Q9Y5A7 615 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 DUSP10Q9Y6W6 482 aa16.17■□□□□ 0.18
RPRD1B-203ENST00000462548 MROH7Q68CQ1 1323 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 PHACTR2O75167 634 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 IL18RAPO95256 599 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 GRM5P41594 1212 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 VAV2P52735 878 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 AP3M2P53677 418 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 MGAT3Q09327 533 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 SPA17Q15506 151 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 SLC18A3Q16572 532 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 PTGISQ16647 500 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 UBXN11Q5T124 520 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 SLC27A1Q6PCB7 646 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 KIAA1328Q86T90 577 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 JAKMIP2Q96AA8 810 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 VTI1AQ96AJ9 217 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 TRMT13Q9NUP7 481 aaKnown RBP16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 NENFQ9UMX5 172 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 PIN4Q9Y237 131 aaKnown RBP16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 TRPV2Q9Y5S1 764 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 BZW2Q9Y6E2 419 aaKnown RBP16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.185e-15■■□□□ 13.1
RPRD1B-203ENST00000462548 DCAF4L1Q3SXM0 396 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 NOTUMQ6P988 496 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 IFIH1Q9BYX4 1025 aaKnown RBP16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 C1orf112Q9NSG2 853 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 SNTG2Q9NY99 539 aa16.16■□□□□ 0.18
RPRD1B-203ENST00000462548 USP8P40818 1118 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 MAGEA1P43355 309 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 MYL6P60660 151 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 GNG11P61952 73 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 GCNT1Q02742 428 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 PCBP1Q15365 356 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 ACAP3Q96P50 834 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 SENP6Q9GZR1 1112 aaPredicted RBP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 NXF3Q9H4D5 531 aaKnown RBP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 DNAI1Q9UI46 699 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 R3HCC1Q9Y3T6 440 aaKnown RBP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 CITO14578 2027 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 CYP26A1O43174 497 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 IPO7O95373 1038 aaKnown RBP16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 SGPL1O95470 568 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 CALCAP01258 141 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 TMEM191BP0C7N4 346 aa16.15■□□□□ 0.18
RPRD1B-203ENST00000462548 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 698.2 ms