RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ZNF20P17024 532 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 ADSLP30566 484 aaPredicted RBP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 ADCY7P51828 1080 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 BPIFB4P59827 614 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 CTXN1P60606 82 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 NKX6-1P78426 367 aaPredicted RBP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 TLE1Q04724 770 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 MTM1Q13496 603 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 LARP4Q71RC2 724 aaKnown RBP eCLIP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 TRMT2AQ8IZ69 625 aaKnown RBP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 CMTM4Q8IZR5 234 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 IFI44Q8TCB0 444 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 SH3RF3Q8TEJ3 882 aaPredicted RBP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 DPF2Q92785 391 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 SLC39A13Q96H72 371 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 SUCLG2Q96I99 432 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 MYD88Q99836 296 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 PDCD2LQ9BRP1 358 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 LRFN3Q9BTN0 628 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 KIAA1683Q9H0B3 1180 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 PHTF1Q9UMS5 762 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 FAM50BQ9Y247 325 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 SIK3Q9Y2K2 1263 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 PCDHA13Q9Y5I0 950 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 ZNF536O15090 1300 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 CFAP69A5D8W1 941 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 C2orf78A6NCI8 922 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 B5MCH6 92 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 APAF1O14727 1248 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 PJA2O43164 708 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 SLC26A4O43511 780 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 NOBOXO60393 691 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 GNAI3P08754 354 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ZNF888P0CJ79 500 aaPredicted RBP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ALAS1P13196 640 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 MYF5P13349 255 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 DDCP20711 480 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 MALP21145 153 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 SMARCA1P28370 1054 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 GZMKP49863 264 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 NEK3P51956 506 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 NPEPPSP55786 919 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 GNAI1P63096 354 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ATP8B2P98198 1209 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 CREMQ03060 361 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 HGFACQ04756 655 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 TARDBPQ13148 414 aaKnown RBP eCLIP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 KRT72Q14CN4 511 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 EMC10Q5UCC4 262 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 MCTP2Q6DN12 878 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 IL31Q6EBC2 164 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 OTUD7BQ6GQQ9 843 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 TOGARAM2Q6ZUX3 1019 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 HEATR3Q7Z4Q2 680 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 DPP9Q86TI2 863 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ZNF761Q86XN6 746 aaPredicted RBP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 PLXDC1Q8IUK5 500 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 AOPEPQ8N6M6 819 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ANKRD53Q8N9V6 530 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ACRBPQ8NEB7 543 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 NLGN4YQ8NFZ3 816 aaPredicted RBP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 CCHCR1Q8TD31 782 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 PGBD4Q96DM1 585 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 IL17RAQ96F46 866 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 C1QTNF3Q9BXJ4 246 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 SEC61A2Q9H9S3 476 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 PNPOQ9NVS9 261 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 PIH1D1Q9NWS0 290 aaKnown RBP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ABCF2Q9UG63 623 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 AJAP1Q9UKB5 411 aaPredicted RBP3.77□□□□□ -1.81
HDAC6-212ENST00000461608 ZDHHC8Q9ULC8 765 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 TPCN1Q9ULQ1 816 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 CLCA2Q9UQC9 943 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 NR2E1Q9Y466 385 aa3.77□□□□□ -1.81
HDAC6-212ENST00000461608 RASA4BC9J798 803 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 H3BUI4 141 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 IFRD1O00458 451 aaPredicted RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 RASA4O43374 803 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 PQBP1O60828 265 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 LDHAP00338 332 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 ANXA1P04083 346 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 SNRPA1P09661 255 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 MTHFD1P11586 935 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 PTPN7P35236 360 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 RAC3P60763 192 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 TGFB2P61812 414 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 PLS1Q14651 629 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 LLGL1Q15334 1064 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 LONRF1Q17RB8 773 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 KHDC1Q4VXA5 237 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 PABPC1LQ4VXU2 614 aaKnown RBP3.76□□□□□ -1.81
HDAC6-212ENST00000461608 FAM47AQ5JRC9 791 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 DACT2Q5SW24 774 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 MFSD5Q6N075 450 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 GLB1LQ6UWU2 654 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 SEM1Q6ZVN7 128 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 GPR155Q7Z3F1 870 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 MORC1Q86VD1 984 aa3.76□□□□□ -1.81
HDAC6-212ENST00000461608 KBTBD2Q8IY47 623 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms