RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 GBP2P32456 591 aaPredicted RBP16.97■□□□□ 0.31
NUP50-213ENST00000461437 LONP1P36776 959 aaKnown RBP16.97■□□□□ 0.31
NUP50-213ENST00000461437 TNFSF9P41273 254 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 NTHL1P78549 312 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP50-213ENST00000461437 UPP1Q16831 310 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 SLC10A6Q3KNW5 377 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 XKR4Q5GH76 650 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 HAUS6Q7Z4H7 955 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 APBB1IPQ7Z5R6 666 aaPredicted RBP16.97■□□□□ 0.31
NUP50-213ENST00000461437 ZDHHC14Q8IZN3 488 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 MYCT1Q8N699 235 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 BICD1Q96G01 975 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 MYADMQ96S97 322 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 IKZF4Q9H2S9 585 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 PIDD1Q9HB75 910 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.97■□□□□ 0.31
NUP50-213ENST00000461437 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 FBXO2Q9UK22 296 aaPredicted RBP16.97■□□□□ 0.31
NUP50-213ENST00000461437 SORCS3Q9UPU3 1222 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 MTMR6Q9Y217 621 aa16.97■□□□□ 0.31
NUP50-213ENST00000461437 CLUHO75153 1309 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 PIEZO1Q92508 2521 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 PODXLO00592 558 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 FAM13AO94988 1023 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 KRT18P05783 430 aaKnown RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 CXCL8P10145 99 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 FGFR3P22607 806 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 NMT1P30419 496 aaKnown RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 OR1D2P34982 312 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 SMTNP53814 917 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 DCLRE1AQ6PJP8 1040 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 GET4Q7L5D6 327 aaPredicted RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 CMASQ8NFW8 434 aaPredicted RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 MFSD14AQ96MC6 490 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
NUP50-213ENST00000461437 FBXW11Q9UKB1 542 aa16.96■□□□□ 0.31
NUP50-213ENST00000461437 TISP43B9A030 160 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 TMEM189-UBE2V1I3L0A0 370 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 K7ELQ4 463 aaPredicted RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 CCL16O15467 120 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 NARSO43776 548 aaKnown RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 TOM1L1O75674 476 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 ZMYND10O75800 440 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 BMP15O95972 392 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 PDCP20941 246 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 FOXD4L5Q5VV16 416 aaPredicted RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 DYMQ7RTS9 669 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 BMP8AQ7Z5Y6 402 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 ALYREFQ86V81 257 aaKnown RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 PRSS33Q8NF86 280 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 FOXD4L4Q8WXT5 416 aaPredicted RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 ACSF2Q96CM8 615 aaPredicted RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 USP28Q96RU2 1077 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 CNTN3Q9P232 1028 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 LARSQ9P2J5 1176 aaKnown RBP16.95■□□□□ 0.3
NUP50-213ENST00000461437 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 CDY1Q9Y6F8 540 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 SCN1AP35498 2009 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 TCHHQ07283 1943 aa16.95■□□□□ 0.3
NUP50-213ENST00000461437 CLDN3O15551 220 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 C8AP07357 584 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 KCNE1P15382 129 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 LIG4P49917 911 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 MCL1Q07820 350 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 ELAVL2Q12926 359 aaKnown RBP16.94■□□□□ 0.3
NUP50-213ENST00000461437 ZC2HC1CQ53FD0 456 aaPredicted RBP16.94■□□□□ 0.3
NUP50-213ENST00000461437 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 OTOP3Q7RTS5 596 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 GRASPQ7Z6J2 395 aaPredicted RBP16.94■□□□□ 0.3
NUP50-213ENST00000461437 SUGP1Q8IWZ8 645 aaKnown RBP16.94■□□□□ 0.3
NUP50-213ENST00000461437 PLCD3Q8N3E9 789 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 FBXL6Q8N531 539 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 FIZ1Q96SL8 496 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 PANK2Q9BZ23 570 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 PRKD2Q9BZL6 878 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 PLEKHA4Q9H4M7 779 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 MTRRQ9UBK8 725 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 TBX20Q9UMR3 447 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 POLIQ9UNA4 740 aa16.94■□□□□ 0.3
NUP50-213ENST00000461437 TRAK2O60296 914 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 ZNF131P52739 623 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 ARPP19P56211 112 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 CREMQ03060 361 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 ZPBP2Q6X784 338 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 GPR65Q8IYL9 337 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 KCTD17Q8N5Z5 321 aa16.93■□□□□ 0.3
NUP50-213ENST00000461437 SLC7A14Q8TBB6 771 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms