RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 AGR3Q8TD06 166 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 C17orf80Q9BSJ5 609 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SIK2Q9H0K1 926 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 POLR3FQ9H1D9 316 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SHANK2Q9UPX8 1470 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 ZC3H4Q9UPT8 1303 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 TNPO2O14787 897 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 NDUFS3O75489 264 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SPAG6O75602 509 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 NPM3O75607 178 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 ENO3P13929 434 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 QARSP47897 775 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 RGS4P49798 205 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SULT1E1P49888 294 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 RCAN1P53805 252 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 IYDQ6PHW0 289 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PUS7LQ9H0K6 701 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 GEMIN8Q9NWZ8 242 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 APPL1Q9UKG1 709 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 MYO3BQ8WXR4 1341 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 A0A087WWV3 80 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 TCP11X1B4DZS4 312 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 TK2O00142 265 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SMAPO00193 183 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 RTN2O75298 545 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 AKT1P31749 480 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PPP3CCP48454 512 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 KIZQ2M2Z5 673 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SLC30A9Q6PML9 568 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 RINLQ6ZS11 566 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 FGD2Q7Z6J4 655 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SNX31Q8N9S9 440 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 WDR35Q9P2L0 1181 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PKP3Q9Y446 797 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SLC30A1Q9Y6M5 507 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 NFIBO00712 420 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 CYP2C19P33261 490 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 KCNK10P57789 538 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SNX17Q15036 470 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 WDR48Q8TAF3 677 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 HES6Q96HZ4 224 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PSMC3IPQ9P2W1 217 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 MTO1Q9Y2Z2 717 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 MAST1Q9Y2H9 1570 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 EVPLLA8MZ36 301 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 ERVV-1B6SEH8 477 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 NCKAP1LP55160 1127 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PSMC5P62195 406 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 ARHGAP17Q68EM7 881 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 FAM180AQ6UWF9 173 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 DDX53Q86TM3 631 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 MICU2Q8IYU8 434 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 C1orf54Q8WWF1 131 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 CCT7Q99832 543 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PRMT1Q99873 361 aaKnown RBP9.45□□□□□ -0.9
BRCA1-205ENST00000461221 EPN3Q9H201 632 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 KDM5DQ9BY66 1539 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 KCNN4O15554 427 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 TRAPPC3O43617 180 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 NCK2O43639 380 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 HOXD10P28358 340 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ANXA11P50995 505 aaKnown RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 DUOXA2Q1HG44 320 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ATPAF2Q8N5M1 289 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 PTPRN2Q92932 1015 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 BBS2Q9BXC9 721 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 RBAKQ9NYW8 714 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SLAIN2Q9P270 581 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 A0A1W2PQC6 194 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 TRIM49BA6NDI0 452 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 MLNP12872 115 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 EFNA5P52803 228 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 GRAPQ13588 217 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 USP10Q14694 798 aaKnown RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 FRMD5Q7Z6J6 570 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SPATA2LQ8IUW3 424 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 APLFQ8IW19 511 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 GRAPLQ8TC17 118 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 OSBP2Q969R2 916 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ATXN7L3BQ96GX2 97 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 CLMNQ96JQ2 1002 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 TIPINQ9BVW5 301 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 CD274Q9NZQ7 290 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 ANKRD65E5RJM6 399 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 CCND1P24385 295 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 MDH1P40925 334 aaKnown RBP9.44□□□□□ -0.9
BRCA1-205ENST00000461221 PRCPP42785 496 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 CENPAP49450 140 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 LVRNQ6Q4G3 990 aa9.44□□□□□ -0.9
BRCA1-205ENST00000461221 SHCBP1Q8NEM2 672 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms