RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PRPF4BQ13523 1007 aaKnown RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 ZACNQ401N2 412 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 HDXQ7Z353 690 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 SLC20A1Q8WUM9 679 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 JPH2Q9BR39 696 aaPredicted RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 DLATP10515 647 aaKnown RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 GZMAP12544 262 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 HSDL1Q3SXM5 330 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 PRPF38BQ5VTL8 546 aaKnown RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 CRELD2Q6UXH1 353 aaPredicted RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 PALB2Q86YC2 1186 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 RHOT2Q8IXI1 618 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
YIPF3-205ENST00000460547 SCFD2Q8WU76 684 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 GLG1Q92896 1179 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 HAPLN2Q9GZV7 340 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 CCDC113Q9H0I3 377 aa18.18■□□□□ 0.5
YIPF3-205ENST00000460547 ZBTB42B2RXF5 422 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 MNX1P50219 401 aaPredicted RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 NLRP11P59045 1033 aaKnown RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 MXD4Q14582 209 aaPredicted RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 TTLL4Q14679 1199 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 PEX26Q7Z412 305 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 NOP9Q86U38 636 aaKnown RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 NT5DC3Q86UY8 548 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 RPUSD2Q8IZ73 545 aaKnown RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 ACTRT1Q8TDG2 376 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 SPATA33Q96N06 139 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 FNBP1Q96RU3 617 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 TARS2Q9BW92 718 aaKnown RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 XPNPEP3Q9NQH7 507 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
YIPF3-205ENST00000460547 TAS2R14Q9NYV8 317 aa18.17■□□□□ 0.5
YIPF3-205ENST00000460547 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 DNM1LO00429 736 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 RTN2O75298 545 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 CHRNB2P17787 502 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 TNFRSF8P28908 595 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 PLCB4Q15147 1175 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 SLC35G2Q8TBE7 412 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 PRPF31Q8WWY3 499 aaKnown RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 ZNF516Q92618 1163 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 HES6Q96HZ4 224 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 MS4A14Q96JA4 679 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 MSTO1Q9BUK6 570 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 SENP6Q9GZR1 1112 aaPredicted RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 SMARCAD1Q9H4L7 1026 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 C1orf112Q9NSG2 853 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 RBAKQ9NYW8 714 aaPredicted RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 EHD2Q9NZN4 543 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 TMEM59LQ9UK28 342 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 PACSIN2Q9UNF0 486 aaPredicted RBP18.16■□□□□ 0.5
YIPF3-205ENST00000460547 NR2E3Q9Y5X4 410 aa18.16■□□□□ 0.5
YIPF3-205ENST00000460547 BUB1BO60566 1050 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 MTA2O94776 668 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 C4BPAP04003 597 aaKnown RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 EDN1P05305 212 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 DAAM2Q86T65 1068 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 RNF180Q86T96 592 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 ARHGEF26Q96DR7 871 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CGRRF1Q99675 332 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 SELENOOQ9BVL4 669 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 THAP2Q9H0W7 228 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 SEPT11Q9NVA2 429 aaKnown RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 SMARCAL1Q9NZC9 954 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 TMCO5BA8MYB1 307 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 KCNK3O14649 394 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CYP26A1O43174 497 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CYP11B1P15538 503 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 PDE6CP51160 858 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CDR2Q01850 454 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 GABPB1Q06547 395 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 DRP2Q13474 957 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 SMYD5Q6GMV2 418 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 C11orf63Q6NUN7 778 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CCNI2Q6ZMN8 369 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 TRIM50Q86XT4 487 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 ZBTB8OSQ8IWT0 167 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 RASGEF1CQ8N431 466 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 LRRC1Q9BTT6 524 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 MRPL4Q9BYD3 311 aaKnown RBP18.15■□□□□ 0.5
YIPF3-205ENST00000460547 VTA1Q9NP79 307 aa18.15■□□□□ 0.5
YIPF3-205ENST00000460547 CNTNAP2Q9UHC6 1331 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 HBP1O60381 514 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 TOM1L1O75674 476 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 HLA-DRAP01903 254 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 FTLP02792 175 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 COL6A1P12109 1028 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms