RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C1orf112Q9NSG2 853 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 PLA2G3Q9NZ20 509 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 PUF60Q9UHX1 559 aaKnown RBP4.39□□□□□ -1.71
RFC4-211ENST00000460408 ATRNL1Q5VV63 1379 aa4.39□□□□□ -1.71
RFC4-211ENST00000460408 CCDC194A0A1B0GVG4 234 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 NRP1O14786 923 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 CTNND1O60716 968 aaKnown RBP4.38□□□□□ -1.71
RFC4-211ENST00000460408 TUSC2O75896 110 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 PEX11BO96011 259 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 KRT4P19013 534 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 USP14P54578 494 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 DUSP2Q05923 314 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 ARHGAP29Q52LW3 1261 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 PRAMEF14Q5SWL7 426 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 DPY19L2P1Q6NXN4 242 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 Q6ZPA2 131 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
RFC4-211ENST00000460408 TMPRSS6Q8IU80 811 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 DENND1CQ8IV53 801 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 GPR135Q8IZ08 494 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 CMTM4Q8IZR5 234 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 PQLC1Q8N2U9 271 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 REPS2Q8NFH8 660 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 PPP1R35Q8TAP8 253 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 IFI44Q8TCB0 444 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 VOPP1Q96AW1 172 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 CYFIP2Q96F07 1278 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 CCDC136Q96JN2 1154 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 MANSC1Q9H8J5 431 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 IL23AQ9NPF7 189 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 RCAN3Q9UKA8 241 aa4.38□□□□□ -1.71
RFC4-211ENST00000460408 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 SLC16A6O15403 523 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 B3GALT2O43825 422 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 RAMP2O60895 175 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CAND2O75155 1236 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 UBXN7O94888 489 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 MYBP10242 640 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 ALOX15P16050 662 aaPredicted RBP4.37□□□□□ -1.71
RFC4-211ENST00000460408 FPR1P21462 350 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 PCSK1P29120 753 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CASRP41180 1078 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 IL12RB1P42701 662 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 MAP2K6P52564 334 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 COL10A1Q03692 680 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 MTM1Q13496 603 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 RIN1Q13671 783 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 PPP4R3AQ6IN85 833 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 TTC7BQ86TV6 843 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 DRC7Q8IY82 874 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CCDC146Q8IYE0 955 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 FAM43AQ8N2R8 423 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CCHCR1Q8TD31 782 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CASKIN2Q8WXE0 1202 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 RAB24Q969Q5 203 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 RGMAQ96B86 450 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 CGRRF1Q99675 332 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 KCNH6Q9H252 994 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 TMEM60Q9H2L4 133 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 ARNT2Q9HBZ2 717 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 DDX21Q9NR30 783 aaKnown RBP eCLIP4.37□□□□□ -1.71
RFC4-211ENST00000460408 LANCL2Q9NS86 450 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 TDP1Q9NUW8 608 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 SLC52A1Q9NWF4 448 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 ZMYM3Q14202 1370 aa4.37□□□□□ -1.71
RFC4-211ENST00000460408 LRRC14BA6NHZ5 514 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 FAM227AF5H4B4 570 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 TPP1O14773 563 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 HRGP04196 525 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 RPLP2P05387 115 aaKnown RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 GZMKP49863 264 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 AGFG1P52594 562 aaKnown RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 HK3P52790 923 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 PER3P56645 1201 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 HHEXQ03014 270 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 TLE1Q04724 770 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 NOGQ13253 232 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 SP140Q13342 867 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 MRPL49Q13405 166 aaKnown RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 GRM7Q14831 915 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 RAB39AQ14964 217 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 MAP9Q49MG5 647 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 MFSD14BQ5SR56 506 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 KRT40Q6A162 431 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 SGMS1Q86VZ5 419 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 KIAA0319LQ8IZA0 1049 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 CAMKK1Q8N5S9 505 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 DCBLD1Q8N8Z6 715 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 SHCBP1Q8NEM2 672 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 PLBD2Q8NHP8 589 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 MDM1Q8TC05 714 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 CEP95Q96GE4 821 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 UHRF1Q96T88 793 aaPredicted RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 SARGQ9BW04 601 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 PCGF6Q9BYE7 350 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 LDAHQ9H6V9 325 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 PARPBPQ9NWS1 579 aa4.36□□□□□ -1.71
RFC4-211ENST00000460408 AJAP1Q9UKB5 411 aaPredicted RBP4.36□□□□□ -1.71
RFC4-211ENST00000460408 FRMPD2Q68DX3 1309 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms