RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 BIRC3Q13489 604 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 NCAPHQ15003 741 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 KRT39Q6A163 491 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 C16orf59Q7L2K0 433 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 CEP120Q8N960 986 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 ANP32BQ92688 251 aaKnown RBP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 RAD9AQ99638 391 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 GDF15Q99988 308 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 IKZF4Q9H2S9 585 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM8AQ9HCN3 771 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 SAMSN1Q9NSI8 373 aaKnown RBP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 LIMA1Q9UHB6 759 aaKnown RBP13.35□□□□□ -0.27
HDAC4-206ENST00000460235 INPP5FQ9Y2H2 1132 aa13.35□□□□□ -0.27
HDAC4-206ENST00000460235 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 A0A1W2PPC1 479 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TBKBP1A7MCY6 615 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TRAPPC3O43617 180 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TLL1O43897 1013 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 GJB5O95377 273 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 ALDH2P05091 517 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 P4HA1P13674 534 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 ZNF18P17022 549 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 ATICP31939 592 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 ALDH7A1P49419 539 aaKnown RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 RBP5P82980 135 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TUSC3Q13454 348 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 VWA3BQ502W6 1294 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 SEZ6Q53EL9 994 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 WDR44Q5JSH3 913 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
HDAC4-206ENST00000460235 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 JADE1Q6IE81 842 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TAF4BQ92750 862 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 LPPQ93052 612 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 EEF2KMTQ96G04 330 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 COLEC11Q9BWP8 271 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 DPP3Q9NY33 737 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 KLK14Q9P0G3 267 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 TTC3P53804 2025 aa13.34□□□□□ -0.27
HDAC4-206ENST00000460235 GOLGA6L3A6NEY3 463 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 CLSTN1O94985 981 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 LAG3P18627 525 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
HDAC4-206ENST00000460235 MXI1P50539 228 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 KCNH2Q12809 1159 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
HDAC4-206ENST00000460235 RAB30Q15771 203 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 ZBTB41Q5SVQ8 909 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 RASIP1Q5U651 963 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 TMEM192Q8IY95 271 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 CRIPAKQ8N1N5 446 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 FIBCD1Q8N539 461 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 IQCDQ96DY2 449 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 MED15Q96RN5 788 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 NDST4Q9H3R1 872 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
HDAC4-206ENST00000460235 SCN5AQ14524 2016 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-206ENST00000460235 ZC3H11AO75152 810 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC4-206ENST00000460235 POMCP01189 267 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 FGFR1P11362 822 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 PPM1AP35813 382 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 FMO5P49326 533 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 SCNN1GP51170 649 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 EPHB4P54760 987 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 UBASH3AP57075 661 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 DEFB103AP81534 67 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 MYL7Q01449 175 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 ELAVL2Q12926 359 aaKnown RBP13.32□□□□□ -0.28
HDAC4-206ENST00000460235 KRT31Q15323 416 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 ZBTB6Q15916 424 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 DCLRE1AQ6PJP8 1040 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 IRF2BP1Q8IU81 584 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 TDHQ8IZJ6 230 aa13.32□□□□□ -0.28
HDAC4-206ENST00000460235 TTC39CQ8N584 583 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms