RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 FAM107BQ9H098 131 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PLCB1Q9NQ66 1216 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 SIP14410 1827 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 KAT6AQ92794 2004 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 INO80B-WBP1J3KQ70 363 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 OPA1O60313 960 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 N4BP1O75113 896 aaKnown RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 ERLIN1O75477 346 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 TRPA1O75762 1119 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PIGRP01833 764 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 UCHL3P15374 230 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 HOXD10P28358 340 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PLA2G4AP47712 749 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MPP3Q13368 585 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 LAMB3Q13751 1172 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 KIAA0753Q2KHM9 967 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 FBXO38Q6PIJ6 1188 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 TRIM65Q6PJ69 517 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 B4GALNT2Q8NHY0 566 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 UHMK1Q8TAS1 419 aaKnown RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 TRIB2Q92519 343 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 BAP1Q92560 729 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 TRIM11Q96F44 468 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 SCLT1Q96NL6 688 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MRPL4Q9BYD3 311 aaKnown RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 RSPH9Q9H1X1 276 aaPredicted RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 AGO2Q9UKV8 859 aaKnown RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 G3BP2Q9UN86 482 aaKnown RBP11.16□□□□□ -0.62
HERC4-207ENST00000460168 ZNF233A6NK53 670 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 KIAA0391O15091 583 aaKnown RBP11.15□□□□□ -0.62
HERC4-207ENST00000460168 CLDN3O15551 220 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 F2P00734 622 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 PRKCBP05771 671 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 EIF4BP23588 611 aaKnown RBP11.15□□□□□ -0.62
HERC4-207ENST00000460168 YY1P25490 414 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 MAGEA10P43363 369 aaPredicted RBP11.15□□□□□ -0.62
HERC4-207ENST00000460168 GCLMP48507 274 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 FXNQ16595 210 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 KIAA1328Q86T90 577 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.62
HERC4-207ENST00000460168 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 TCHPQ9BT92 498 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 MSTO1Q9BUK6 570 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 TSGA10Q9BZW7 698 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 GANQ9H2C0 597 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 Q9Y3F1 56 aa11.15□□□□□ -0.62
HERC4-207ENST00000460168 EXTL3O43909 919 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 MSCO60682 206 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 NDUFA10O95299 355 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 IGHA2P01877 340 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 VTNP04004 478 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 EDN1P05305 212 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 MYL3P08590 195 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 DLATP10515 647 aaKnown RBP11.15□□□□□ -0.63
HERC4-207ENST00000460168 HNRNPH3P31942 346 aaKnown RBP11.15□□□□□ -0.63
HERC4-207ENST00000460168 PHKA2P46019 1235 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 ACOT2P49753 483 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 MXI1P50539 228 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 BEX3Q00994 111 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 NSUN2Q08J23 767 aaKnown RBP eCLIP11.15□□□□□ -0.63
HERC4-207ENST00000460168 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.63
HERC4-207ENST00000460168 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 PDXDC1Q6P996 788 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 ZPBP2Q6X784 338 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 MYO1HQ8N1T3 1032 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 PHACTR1Q9C0D0 580 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.63
HERC4-207ENST00000460168 SETD4Q9NVD3 440 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.63
HERC4-207ENST00000460168 STYXL1Q9Y6J8 313 aa11.15□□□□□ -0.63
HERC4-207ENST00000460168 GOLGA6L9A6NEM1 432 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 RRN3P2A6NIE6 340 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 ATP8B1O43520 1251 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 TOM1L1O75674 476 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 LDHAP00338 332 aaKnown RBP11.14□□□□□ -0.63
HERC4-207ENST00000460168 C6orf222P0C671 652 aaPredicted RBP11.14□□□□□ -0.63
HERC4-207ENST00000460168 CYBAP13498 195 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 CYLC1P35663 651 aaPredicted RBP11.14□□□□□ -0.63
HERC4-207ENST00000460168 PTENP60484 403 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 CDK17Q00537 523 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 PPP3CAQ08209 521 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 TDRD12Q587J7 1177 aaKnown RBP11.14□□□□□ -0.63
HERC4-207ENST00000460168 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 NACC2Q96BF6 587 aa11.14□□□□□ -0.63
HERC4-207ENST00000460168 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms