RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ALKAL1Q6UXT8 129 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 NXPE3Q969Y0 559 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 AK8Q96MA6 479 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 TBC1D32Q96NH3 1257 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 MYADMQ96S97 322 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 GOLGA2P5Q9HBQ8 144 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 MTRRQ9UBK8 725 aa24.96■■□□□ 1.59
PTPN4-207ENST00000460162 C8AP07357 584 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 SMTNP53814 917 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 SLC12A3P55017 1021 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 OSTNP61366 133 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 ASTLQ6HA08 431 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-207ENST00000460162 GET4Q7L5D6 327 aaPredicted RBP24.95■■□□□ 1.58
PTPN4-207ENST00000460162 TMEM105Q8N8V8 129 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 DDX27Q96GQ7 796 aaKnown RBP24.95■■□□□ 1.58
PTPN4-207ENST00000460162 ACAP3Q96P50 834 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 TCHPQ9BT92 498 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 CNTN3Q9P232 1028 aa24.95■■□□□ 1.58
PTPN4-207ENST00000460162 GALR2O43603 387 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-207ENST00000460162 TOM1L1O75674 476 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 POU2F2P09086 479 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 KCNE1P15382 129 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 CLCN5P51795 746 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 SOX4Q06945 474 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-207ENST00000460162 RAB33AQ14088 237 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 PPM1LQ5SGD2 360 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 ANKS3Q6ZW76 656 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 C3orf58Q8NDZ4 430 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 TMEM161BQ8NDZ6 487 aa24.94■■□□□ 1.58
PTPN4-207ENST00000460162 ZFP37Q9Y6Q3 630 aaPredicted RBP24.94■■□□□ 1.58
PTPN4-207ENST00000460162 SFI1A8K8P3 1242 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 ADAM12O43184 909 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 BMP15O95972 392 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 PLA2G4BP0C869 781 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 MAPTP10636 758 aaKnown RBP24.93■■□□□ 1.58
PTPN4-207ENST00000460162 RAD51AP2Q09MP3 1159 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 NOLC1Q14978 699 aaKnown RBP eCLIP24.93■■□□□ 1.58
PTPN4-207ENST00000460162 CWF19L1Q69YN2 538 aaKnown RBP24.93■■□□□ 1.58
PTPN4-207ENST00000460162 CD300LGQ6UXG3 332 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 ZPBP2Q6X784 338 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 BRAPQ7Z569 592 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 LARSQ9P2J5 1176 aaKnown RBP24.93■■□□□ 1.58
PTPN4-207ENST00000460162 ANKFY1Q9P2R3 1169 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 FBXL21Q9UKT6 434 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 BACE2Q9Y5Z0 518 aa24.93■■□□□ 1.58
PTPN4-207ENST00000460162 H0YCG3 227 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 PODXLO00592 558 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 XYLBO75191 536 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 LAMP2P13473 410 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 TKTP29401 623 aaKnown RBP24.92■■□□□ 1.58
PTPN4-207ENST00000460162 LARP1BQ659C4 914 aaKnown RBP24.92■■□□□ 1.58
PTPN4-207ENST00000460162 RTL10Q7L3V2 364 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 KCNN1Q92952 543 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 ZMAT2Q96NC0 199 aaKnown RBP24.92■■□□□ 1.58
PTPN4-207ENST00000460162 PHOX2BQ99453 314 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 PLIN2Q99541 437 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 ODF2LQ9ULJ1 636 aa24.92■■□□□ 1.58
PTPN4-207ENST00000460162 HARSP12081 509 aaKnown RBP24.91■■□□□ 1.58
PTPN4-207ENST00000460162 FSHRP23945 695 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 IGFBP6P24592 240 aaPredicted RBP24.91■■□□□ 1.58
PTPN4-207ENST00000460162 OR1D2P34982 312 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 SLC7A14Q8TBB6 771 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 RSAD2Q8WXG1 361 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 CALML4Q96GE6 196 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 CDY1Q9Y6F8 540 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 DOCK6Q96HP0 2047 aa24.91■■□□□ 1.58
PTPN4-207ENST00000460162 NARSO43776 548 aaKnown RBP24.9■■□□□ 1.58
PTPN4-207ENST00000460162 SRFP11831 508 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 BRCC3P46736 316 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 NCKAP1LP55160 1127 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 HTR4Q13639 388 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 UVSSAQ2YD98 709 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 AXDND1Q5T1B0 1012 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-207ENST00000460162 GRASPQ7Z6J2 395 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-207ENST00000460162 FLCNQ8NFG4 579 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 WNT16Q9UBV4 365 aa24.9■■□□□ 1.58
PTPN4-207ENST00000460162 MYH15Q9Y2K3 1946 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 ANHXE9PGG2 379 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 I3L4J1 428 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 SYN3O14994 580 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 AOC1P19801 751 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 SCP2P22307 547 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 RPL9P32969 192 aaKnown RBP24.89■■□□□ 1.58
PTPN4-207ENST00000460162 UBA7P41226 1012 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 MCL1Q07820 350 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 SIX5Q8N196 739 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 SLC44A3Q8N4M1 653 aa24.89■■□□□ 1.58
PTPN4-207ENST00000460162 ZBTB45Q96K62 511 aaPredicted RBP24.89■■□□□ 1.58
PTPN4-207ENST00000460162 CCL16O15467 120 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 CLDN3O15551 220 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 MEFVO15553 781 aaPredicted RBP24.88■■□□□ 1.57
PTPN4-207ENST00000460162 NPR3P17342 541 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 LONP1P36776 959 aaKnown RBP24.88■■□□□ 1.57
PTPN4-207ENST00000460162 CACNB1Q02641 598 aaPredicted RBP24.88■■□□□ 1.57
PTPN4-207ENST00000460162 ARSHQ5FYA8 562 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 SLC8B1Q6J4K2 584 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 RSPO2Q6UXX9 243 aaPredicted RBP24.88■■□□□ 1.57
PTPN4-207ENST00000460162 ATOH1Q92858 354 aaPredicted RBP24.88■■□□□ 1.57
PTPN4-207ENST00000460162 REEP2Q9BRK0 252 aa24.88■■□□□ 1.57
PTPN4-207ENST00000460162 CDH7Q9ULB5 785 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms