RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CNGA3Q16281 694 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 HORMAD1Q86X24 394 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 FAM9CQ8IZT9 166 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 PCYOX1LQ8NBM8 494 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 RBBP8Q99708 897 aa9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
SHROOM4-203ENST00000460112 ITIH6Q6UXX5 1313 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 H7C0S8 307 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 MFAP3LO75121 409 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PDAP1Q13442 181 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 C6orf203Q9P0P8 240 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 INPP5FQ9Y2H2 1132 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 NDUFB9Q9Y6M9 179 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 TMEM2Q9UHN6 1383 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 TPI1P60174 286 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 DGKHQ86XP1 1220 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 ANKRD13CQ8N6S4 541 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 KCND2Q9NZV8 630 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 WBP4O75554 376 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 SERPINB9P50453 376 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 SNRPFP62306 86 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 ARHGAP15Q53QZ3 475 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 RESP18Q5W5W9 173 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 UGT3A1Q6NUS8 523 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 KRT78Q8N1N4 520 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PARD6BQ9BYG5 372 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 POLR3FQ9H1D9 316 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 MADDQ8WXG6 1647 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 CCDC195A0A1B0GUA6 201 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 LGALS16A8MUM7 142 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 VCLP18206 1134 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 OR6P1Q8NGX9 317 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 ADNPQ9H2P0 1102 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 GREM2Q9H772 168 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 AFF4Q9UHB7 1163 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 DNAJC12Q9UKB3 198 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 HIF1AQ16665 826 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST2H2ACQ16777 129 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 HIST2H2AA3Q6FI13 130 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 LRIG3Q6UXM1 1119 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 RIC8BQ9NVN3 520 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 C3orf70A6NLC5 250 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 PEX3P56589 373 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 GPS1Q13098 491 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 GPD1LQ8N335 351 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 RAD54LQ92698 747 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 WDR35Q9P2L0 1181 aa9.34□□□□□ -0.91
SHROOM4-203ENST00000460112 UBA6A0AVT1 1052 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 PHKA1P46020 1223 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 PPP2R2AP63151 447 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 OSCP1Q8WVF1 389 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 ARL8AQ96BM9 186 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 IL1RAPL1Q9NZN1 696 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 SOWAHDA6NJG2 315 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 MTSS1O43312 755 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 MAPK1P28482 360 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 KLC1Q07866 573 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 KCNB1Q14721 858 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 RHPN2Q8IUC4 686 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 TUBGCP3Q96CW5 907 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 SPATA33Q96N06 139 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 XPO6Q96QU8 1125 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 COQ7Q99807 217 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 GDAQ9Y2T3 454 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 MLNP12872 115 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 TYK2P29597 1187 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 RAB14P61106 215 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 GUCY1A3Q02108 690 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 LRRC41Q15345 812 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 CCDC142Q17RM4 750 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 ANKRD40Q6AI12 368 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 SNRNP48Q6IEG0 339 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 RCSD1Q6JBY9 416 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 CHMP1BQ7LBR1 199 aa9.33□□□□□ -0.92
SHROOM4-203ENST00000460112 AGGF1Q8N302 714 aaeCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms