RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ALKAL1Q6UXT8 129 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 FILIP1Q7Z7B0 1213 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 IRF2BP1Q8IU81 584 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 BRSK2Q8IWQ3 736 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 EFCAB13Q8IY85 973 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 OR5B17Q8NGF7 314 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 MFSD14AQ96MC6 490 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 RPS6KC1Q96S38 1066 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 YME1L1Q96TA2 773 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 NAT10Q9H0A0 1025 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 MTIF3Q9H2K0 278 aaKnown RBP9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 DNAJB4Q9UDY4 337 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 TUBGCP4Q9UGJ1 667 aa9.42□□□□□ -0.9
CLTCL1-204ENST00000458188 CASTOR2A6NHX0 329 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 LRRIQ3A6PVS8 624 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 BECN2A8MW95 431 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 NT5C1B-RDH14C9J2C7 533 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 F8W810 466 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 KIAA0391O15091 583 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 KRT13P13646 458 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 CDK11BP21127 795 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 GCLMP48507 274 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 VAMP7P51809 220 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 MYL5Q02045 173 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 RNASELQ05823 741 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 PSMD6Q15008 389 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 C1orf220Q5T0J3 134 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 SPOUT1Q5T280 376 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 ZC3H3Q8IXZ2 948 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 PHOSPHO2Q8TCD6 241 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 URGCPQ8TCY9 931 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 PARD3BQ8TEW8 1205 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 ZNF689Q96CS4 500 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 BORCS6Q96GS4 357 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 CNOT6LQ96LI5 555 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 CEP63Q96MT8 703 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 FAM193BQ96PV7 902 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 FNBP1Q96RU3 617 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 SLC9A7Q96T83 725 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 PAAF1Q9BRP4 392 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 C1QTNF1Q9BXJ1 281 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 TMEM117Q9H0C3 514 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 RBSNQ9H1K0 784 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 HSD3B7Q9H2F3 369 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 NRDE2Q9H7Z3 1164 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 CERS4Q9HA82 394 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 KIAA1586Q9HCI6 787 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 UBN1Q9NPG3 1134 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 TBC1D13Q9NVG8 400 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 MTUS1Q9ULD2 1270 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 MRPL42Q9Y6G3 142 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 EYSQ5T1H1 3165 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 TET1Q8NFU7 2136 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 NCOR1O75376 2440 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 LOXHD1Q8IVV2 1947 aa9.41□□□□□ -0.9
CLTCL1-204ENST00000458188 SMTNL1A8MU46 457 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 KCNJ18B7U540 433 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PPEF2O14830 753 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 ZC3H11AO75152 810 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 LRRN2O75325 713 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 CSPG5O95196 566 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 IL18RAPO95256 599 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 THP07101 528 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 KRT19P08727 400 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 ATP1A3P13637 1013 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 OR1G1P47890 313 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PPP3CAQ08209 521 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 BFSP1Q12934 665 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 KCNJ12Q14500 433 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 TMEM132DQ14C87 1099 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 KYAT1Q16773 422 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PTPN21Q16825 1174 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 XKR4Q5GH76 650 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 HASPINQ8TF76 798 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 ATXN2LQ8WWM7 1075 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PPP1R10Q96QC0 940 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 RAD9AQ99638 391 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 BPIFA3Q9BQP9 254 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PBX4Q9BYU1 374 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 VPS16Q9H269 839 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 NKX2-4Q9H2Z4 354 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 TTYH1Q9H313 450 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 THAP9Q9H5L6 903 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 CWH43Q9H720 699 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PLEKHA5Q9HAU0 1116 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 CNTN3Q9P232 1028 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 MAGEC2Q9UBF1 373 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 ARMCX3Q9UH62 379 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms