RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
VEGFA-210ENST00000457104 STRN3Q13033 797 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 DHX8Q14562 1220 aaKnown RBP13.55□□□□□ -0.24
VEGFA-210ENST00000457104 PSMD5Q16401 504 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 SPECC1Q5M775 1068 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 CYP26C1Q6V0L0 522 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 ZPBP2Q6X784 338 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 CCDC149Q6ZUS6 474 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 RAD54LQ92698 747 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 UROC1Q96N76 676 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 ACAP3Q96P50 834 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-210ENST00000457104 CNTN3Q9P232 1028 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
VEGFA-210ENST00000457104 DPP7Q9UHL4 492 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-210ENST00000457104 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 MTMR6Q9Y217 621 aa13.55□□□□□ -0.24
VEGFA-210ENST00000457104 ZDBF2Q9HCK1 2354 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 I3L4J1 428 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 MCL1Q07820 350 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 RSPO2Q6UXX9 243 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 FAM122AQ96E09 287 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 WDR6Q9NNW5 1121 aaKnown RBP13.54□□□□□ -0.24
VEGFA-210ENST00000457104 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 ANKFY1Q9P2R3 1169 aa13.54□□□□□ -0.24
VEGFA-210ENST00000457104 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 CLDN3O15551 220 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 FAM189A1O60320 539 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 ZMYND10O75800 440 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 DDIT3P35638 169 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 BRCC3P46736 316 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 OTOP3Q7RTS5 596 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 UBALD2Q8IYN6 164 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 SMG7Q92540 1137 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 SLC38A7Q9NVC3 462 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 FBXW11Q9UKB1 542 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
VEGFA-210ENST00000457104 SRPRBQ9Y5M8 271 aaKnown RBP13.53□□□□□ -0.24
VEGFA-210ENST00000457104 TTC26A0AVF1 554 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 H0YCG3 227 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 TRAK2O60296 914 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 FAM13AO94988 1023 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 PDGFBP01127 241 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-210ENST00000457104 PIGRP01833 764 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 OR1D2P34982 312 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 CEBPZQ03701 1054 aaKnown RBP13.52□□□□□ -0.25
VEGFA-210ENST00000457104 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 RAB33AQ14088 237 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 ZBTB6Q15916 424 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 PDXDC1Q6P996 788 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 ACSF2Q96CM8 615 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-210ENST00000457104 USP28Q96RU2 1077 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 PARVGQ9HBI0 331 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 MORC2Q9Y6X9 1032 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-210ENST00000457104 CLUHO75153 1309 aa13.52□□□□□ -0.25
VEGFA-210ENST00000457104 SCN1AP35498 2009 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 PODXLO00592 558 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 STX6O43752 255 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 CLTAP09496 248 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 CXCL8P10145 99 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 SCP2P22307 547 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
VEGFA-210ENST00000457104 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
VEGFA-210ENST00000457104 TNFSF9P41273 254 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 GTF2BQ00403 316 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 SLC39A14Q15043 492 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 IER5LQ5T953 404 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 RASSF8Q8NHQ8 419 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 SNX21Q969T3 373 aa13.51□□□□□ -0.25
VEGFA-210ENST00000457104 MYADMQ96S97 322 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms