RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	CRHR2	Q13324	411 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	AUH	Q13825	339 aa	Known RBP	5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	CDC37	Q16543	378 aa	Predicted RBP	5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	FAM26F	Q5R3K3	315 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	WDR78	Q5VTH9	848 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	CPLX2	Q6PUV4	134 aa	Known RBP	5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	NLRC3	Q7RTR2	1065 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	ANKRD23	Q86SG2	305 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	FAM160B2	Q86V87	743 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	CPXCR1	Q8N123	301 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	TMTC2	Q8N394	836 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	SRBD1	Q8N5C6	995 aa	Known RBP	5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	ANKRD13C	Q8N6S4	541 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	FANCB	Q8NB91	859 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	DDX11	Q96FC9	970 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	TSPAN17	Q96FV3	270 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	TMX3	Q96JJ7	454 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	RHOV	Q96L33	236 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	PTPN18	Q99952	460 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	SLC26A6	Q9BXS9	759 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	SEMA4A	Q9H3S1	761 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	VAT1L	Q9HCJ6	419 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	HOMER2	Q9NSB8	354 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	FEM1B	Q9UK73	627 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZNF236	Q9UL36	1845 aa		5.37	□□□□□ -1.55
COL21A1-204	ENST00000456983	CCDC196	A0A1B0GTZ2	297 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	VWA5A	O00534	786 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CYTH3	O43739	400 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CDKL5	O76039	1030 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	L1CAM	P32004	1257 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	MCM2	P49736	904 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	GNAQ	P50148	359 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	RCAN1	P53805	252 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	AKAP17A	Q02040	695 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	BECN1	Q14457	450 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	SLC35G1	Q2M3R5	365 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	QRICH1	Q2TAL8	776 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	OTUD7B	Q6GQQ9	843 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	SNRNP48	Q6IEG0	339 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CATSPERG	Q6ZRH7	1159 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	HEATR3	Q7Z4Q2	680 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	ADGRF4	Q8IZF3	695 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	FBXL16	Q8N461	479 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	NSUN7	Q8NE18	718 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	ADAMTS17	Q8TE56	1095 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CHURC1	Q8WUH1	139 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZBTB8A	Q96BR9	441 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	RRP36	Q96EU6	259 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZNF274	Q96GC6	653 aa	Predicted RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	PIGS	Q96S52	555 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	MAP3K14	Q99558	947 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	P2RX7	Q99572	595 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	SPZ1	Q9BXG8	430 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	RAVER2	Q9HCJ3	691 aa	Known RBP	5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	TXNRD2	Q9NNW7	524 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CPA4	Q9UI42	421 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	CCPG1	Q9ULG6	757 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	PCDHB14	Q9Y5E9	798 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	ADGRA2	Q96PE1	1338 aa		5.36	□□□□□ -1.55
COL21A1-204	ENST00000456983	MCM3AP	O60318	1980 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CASP8AP2	Q9UKL3	1982 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	MYPN	Q86TC9	1320 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	STK36	Q9NRP7	1315 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	MROH6	A6NGR9	719 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	DNAJA2	O60884	412 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	PPP1R11	O60927	126 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZBED4	O75132	1171 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CNMD	O75829	334 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CTDNEP1	O95476	244 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	ALAS1	P13196	640 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	HOXA7	P31268	230 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	MAP2K2	P36507	400 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	NAPA	P54920	295 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	EVC	P57679	992 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	PURA	Q00577	322 aa	Known RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CACNB2	Q08289	660 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	SSRP1	Q08945	709 aa	Known RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	COG2	Q14746	738 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	TMEM132B	Q14DG7	1078 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CRB2	Q5IJ48	1285 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	WWC2	Q6AWC2	1192 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CRIP3	Q6Q6R5	217 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	CRTC3	Q6UUV7	619 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	PRPF38A	Q8NAV1	312 aa	Known RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	FAM184A	Q8NB25	1140 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	TMEM52	Q8NDY8	209 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	SNX21	Q969T3	373 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	AIFM3	Q96NN9	605 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	LZTS2	Q9BRK4	669 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	TEX13B	Q9BXU2	312 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	SPATC1L	Q9H0A9	340 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	VPS11	Q9H270	941 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	RANBP17	Q9H2T7	1088 aa	Known RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	JMJD4	Q9H9V9	463 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	SLC38A10	Q9HBR0	1119 aa		5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	ZCCHC17	Q9NP64	241 aa	Known RBP	5.35	□□□□□ -1.55
COL21A1-204	ENST00000456983	RNF146	Q9NTX7	359 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms