RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CXCL8P10145 99 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 HOXB8P17481 243 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 CMA1P23946 247 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 SSTR3P32745 418 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 AFMP43652 599 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 DSG1Q02413 1049 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 NAB2Q15742 525 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 XKR4Q5GH76 650 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 L1TD1Q5T7N2 865 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 ELMSAN1Q6PJG2 1045 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 VN1R2Q8NFZ6 395 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 POMGNT1Q8WZA1 660 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 B3GALT6Q96L58 329 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 TRIM9Q9C026 710 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 HAPLN2Q9GZV7 340 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 GOLGA2P5Q9HBQ8 144 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 CNTN3Q9P232 1028 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 AGO2Q9UKV8 859 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 A0A0B4J269 797 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 A0A1B0GVL5 298 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 XPOTO43592 962 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 MYBP10242 640 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 TNFSF9P41273 254 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 CREMQ03060 361 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 KIAA0319Q5VV43 1072 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 CES5AQ6NT32 575 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 KIF12Q96FN5 646 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 ZMAT2Q96NC0 199 aaKnown RBP19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 C7orf25Q9BPX7 421 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 TTPALQ9BTX7 342 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 TMEM206Q9H813 350 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 SERTAD1Q9UHV2 236 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 NUB1Q9Y5A7 615 aa19.69■□□□□ 0.74
PDLIM2-215ENST00000456545 BRWD1Q9NSI6 2320 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 FRMD3A2A2Y4 597 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 LACTBL1A8MY62 500 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 PODXLO00592 558 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 LILRB3O75022 631 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 PRPF6O94906 941 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 EPCAMP16422 314 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 RPL9P32969 192 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 SPAG1Q07617 926 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 KCNC3Q14003 757 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 SMAD2Q15796 467 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 UPP1Q16831 310 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 GLYCTKQ8IVS8 523 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 CD302Q8IX05 232 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 RNF168Q8IYW5 571 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 SMRP1Q8NCR6 262 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 NOC3LQ8WTT2 800 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 C18orf25Q96B23 403 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 BLZF1Q9H2G9 400 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 CHST7Q9NS84 486 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 DZANK1Q9NVP4 752 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 PRKAG3Q9UGI9 489 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 DPP7Q9UHL4 492 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 USP25Q9UHP3 1055 aa19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-215ENST00000456545 GOLGA6L4A6NEF3 574 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 TEX28O15482 410 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 SLFN14P0C7P3 912 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 PFKFB1P16118 471 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 ACOT2P49753 483 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 SOX4Q06945 474 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 SLC39A4Q6P5W5 647 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 PDXDC1Q6P996 788 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 PALB2Q86YC2 1186 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 SLC22A17Q8WUG5 538 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 POP1Q99575 1024 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 RXFP1Q9HBX9 757 aa19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 UBQLN1Q9UMX0 589 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 USP15Q9Y4E8 981 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-215ENST00000456545 TTC26A0AVF1 554 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 TISP43B9A030 160 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 TMEM189-UBE2V1I3L0A0 370 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 PPP1R37O75864 691 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 EFEMP2O95967 443 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 SYKP43405 635 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 CASP5P51878 434 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 KCNA1Q09470 495 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 ENOX2Q16206 610 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 ZBTB41Q5SVQ8 909 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 RARS2Q5T160 578 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 SYCE2Q6PIF2 218 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 PRSS55Q6UWB4 352 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 UNC13DQ70J99 1090 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 GJD3Q8N144 294 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 FBXL18Q96ME1 805 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 TSPAN18Q96SJ8 248 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 STRA6Q9BX79 667 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 GDPD2Q9HCC8 539 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 CPSF3Q9UKF6 684 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 TCHHQ07283 1943 aa19.66■□□□□ 0.74
PDLIM2-215ENST00000456545 LDHAP00338 332 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 GLUD1P00367 558 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 CASP1P29466 404 aa19.65■□□□□ 0.74
PDLIM2-215ENST00000456545 CLCN4P51793 760 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms