RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PARP4Q9UKK3 1724 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 AHCYL1O43865 530 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 SNX2O60749 519 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KCNA3P22001 575 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 STK4Q13043 487 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 BICC1Q9H694 974 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MOV10Q9HCE1 1003 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 HERC5Q9UII4 1024 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CRB1P82279 1406 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 A0A087WXM4 84 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 TBX3O15119 743 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 SLC2A3P11169 496 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 SLC9A1P19634 815 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RGS4P49798 205 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 HSD17B4P51659 736 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KRT72Q14CN4 511 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FAM172AQ8WUF8 416 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 NLRP4Q96MN2 994 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 HPCAL4Q9UM19 191 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MROH7-TTC4A0A0A0MT08 1334 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 UBAP1LF5GYI3 381 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 TIMM44O43615 452 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FGGP02679 453 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RPL3P39023 403 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PIK3CAP42336 1068 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PTGDRQ13258 359 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MYBPC2Q14324 1141 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LCORLQ8N3X6 602 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 XAGE3Q8WTP9 111 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ZWILCHQ9H900 591 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FKBP14Q9NWM8 211 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 SNAP91O60641 907 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MMP1P03956 469 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 EFNA5P52803 228 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 IFRD2Q12894 506 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PDAP1Q13442 181 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RCN1Q15293 331 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ALKBH5Q6P6C2 394 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LMBR1LQ6UX01 489 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LRRC31Q6UY01 552 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ZCRB1Q8TBF4 217 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 BHMTQ93088 406 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KRT84Q9NSB2 600 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 DUOX1Q9NRD9 1551 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ERCC2P18074 760 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 LSP1P33241 339 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ETFBP38117 255 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TUFMP49411 452 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GNA13Q14344 377 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 DIXDC1Q155Q3 683 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SPATS1Q496A3 300 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ZCWPW2Q504Y3 356 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SPATA21Q7Z572 469 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 DEPDC1BQ8WUY9 529 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 HAVCR1Q96D42 359 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 AGBL1Q96MI9 1066 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CCT8L2Q96SF2 557 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CCDC87Q9NVE4 849 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MAGEB16A2A368 324 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TMEM110-MUSTN1A8MSY1 372 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 K7ENM7 598 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 WWP2O00308 870 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ASNA1O43681 348 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PIK3CGP48736 1102 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RUNDC3AQ59EK9 446 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TRAF7Q6Q0C0 670 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RDH13Q8NBN7 331 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ATP6V1E2Q96A05 226 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 SLC24A2Q9UI40 661 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PCDHA13Q9Y5I0 950 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 KDM6AO15550 1401 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CFAP99D6REC4 459 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PRR29P0C7W0 189 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GTF2H1P32780 548 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 RAD51Q06609 339 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MCL1Q07820 350 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MAD2L1Q13257 205 aaPredicted RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ADCK5Q3MIX3 580 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 PIK3AP1Q6ZUJ8 805 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ADCK1Q86TW2 530 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MAP3K20Q9NYL2 800 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GRID1Q9ULK0 1009 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 LZTS1Q9Y250 596 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ERI2A8K979 691 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TRPA1O75762 1119 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 KRT19P08727 400 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 STIP1P31948 543 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 GRIK1P39086 918 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 MDH1P40925 334 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 CLK1P49759 484 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 USP11P51784 963 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ROR2Q01974 943 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 DNAJC3Q13217 504 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF790Q6PG37 636 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 WBP11Q9Y2W2 641 aaKnown RBP5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM49P0CI25 452 aa5.47□□□□□ -1.53
CSMD3-204ENST00000455883 TRIM49CP0CI26 452 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms