RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 KXD1Q9BQD3 176 aa20.59■□□□□ 0.89
MSH6-206ENST00000455383 GPR179Q6PRD1 2367 aa20.59■□□□□ 0.89
MSH6-206ENST00000455383 FRYLO94915 3013 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 FAM170BA6NMN3 283 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 SPTLC1O15269 473 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 ECI2O75521 394 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 B3GAT3O94766 335 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 UPP1Q16831 310 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 NT5DC1Q5TFE4 455 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 POTEHQ6S545 545 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 NELL1Q92832 810 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 UROC1Q96N76 676 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 SPATA6Q9NWH7 488 aaPredicted RBP20.58■□□□□ 0.89
MSH6-206ENST00000455383 GDAQ9Y2T3 454 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 CDY1Q9Y6F8 540 aa20.58■□□□□ 0.89
MSH6-206ENST00000455383 LAMTOR5O43504 91 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 JAK2O60674 1132 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 MUTP22033 750 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 CLCNKBP51801 687 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 UBXN2BQ14CS0 331 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 PPP2R5AQ15172 486 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 TMEM132AQ24JP5 1023 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 ANKS3Q6ZW76 656 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 ZBTB44Q8NCP5 570 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 C3orf58Q8NDZ4 430 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 DDX27Q96GQ7 796 aaKnown RBP20.57■□□□□ 0.88
MSH6-206ENST00000455383 HINFPQ9BQA5 517 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 GDE1Q9NZC3 331 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 PCDHGA2Q9Y5H1 932 aa20.57■□□□□ 0.88
MSH6-206ENST00000455383 CEP250Q9BV73 2442 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 ARHGEF37A1IGU5 675 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 ARHGEF35A5YM69 484 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 SHISA7A6NL88 538 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 TARSP26639 723 aaKnown RBP20.56■□□□□ 0.88
MSH6-206ENST00000455383 TKTP29401 623 aaKnown RBP20.56■□□□□ 0.88
MSH6-206ENST00000455383 MCM7P33993 719 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 EFNA5P52803 228 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 FZD5Q13467 585 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 SLC5A9Q2M3M2 681 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 XKR4Q5GH76 650 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 GLRA4Q5JXX5 417 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 SLC8B1Q6J4K2 584 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 NELL2Q99435 816 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 KIFC3Q9BVG8 833 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 PLA2G2FQ9BZM2 168 aa20.56■□□□□ 0.88
MSH6-206ENST00000455383 MRPS23Q9Y3D9 190 aaKnown RBP20.56■□□□□ 0.88
MSH6-206ENST00000455383 LILRB5O75023 590 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ABLIM3O94929 683 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 RHOP08100 348 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 LIG1P18858 919 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 CD72P21854 359 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 RPS9P46781 194 aaKnown RBP20.55■□□□□ 0.88
MSH6-206ENST00000455383 ST3GAL1Q11201 340 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
MSH6-206ENST00000455383 TRIM29Q14134 588 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ZBTB41Q5SVQ8 909 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ATF7IP2Q5U623 682 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ALKAL1Q6UXT8 129 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ZNF461Q8TAF7 563 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 ING5Q8WYH8 240 aa20.55■□□□□ 0.88
MSH6-206ENST00000455383 SMIM28A0A1B0GU29 152 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 TRAPPC3O43617 180 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 TBC1D4O60343 1298 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 OR52Z1P0C646 297 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 BRCC3P46736 316 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 FOSBP53539 338 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 ROR1Q01973 937 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 CSTF1Q05048 431 aaKnown RBP20.54■□□□□ 0.88
MSH6-206ENST00000455383 SOX4Q06945 474 aaPredicted RBP20.54■□□□□ 0.88
MSH6-206ENST00000455383 PRSS36Q5K4E3 855 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 VARS2Q5ST30 1063 aaKnown RBP20.54■□□□□ 0.88
MSH6-206ENST00000455383 TPRG1Q6ZUI0 275 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 ERMNQ8TAM6 284 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 ELSPBP1Q96BH3 223 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 MCRS1Q96EZ8 462 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 GOLGA2P5Q9HBQ8 144 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 PTPRHQ9HD43 1115 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 PRMT8Q9NR22 394 aaPredicted RBP20.54■□□□□ 0.88
MSH6-206ENST00000455383 ZSCAN32Q9NX65 697 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 TNFSF13BQ9Y275 285 aa20.54■□□□□ 0.88
MSH6-206ENST00000455383 I3L4J1 428 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 FCARP24071 287 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 GRM5P41594 1212 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 ECM1Q16610 540 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 TANGO2Q6ICL3 276 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 ZNF687Q8N1G0 1237 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 KIFAP3Q92845 792 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 DNASE1L2Q92874 299 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 IFT74Q96LB3 600 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 EPC1Q9H2F5 836 aa20.53■□□□□ 0.88
MSH6-206ENST00000455383 TRIP11Q15643 1979 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 WDR27A2RRH5 827 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 NCAM2O15394 837 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 MICAL2O94851 1124 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 CEBPBP17676 345 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 PTPN2P17706 415 aa20.52■□□□□ 0.88
MSH6-206ENST00000455383 MRPL58Q14197 206 aaKnown RBP20.52■□□□□ 0.88
MSH6-206ENST00000455383 RSPO4Q2I0M5 234 aaPredicted RBP20.52■□□□□ 0.88
MSH6-206ENST00000455383 APBB1IPQ7Z5R6 666 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms