RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ACKR2O00590 384 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 SPTLC1O15269 473 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 KINO60870 393 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 RECQL4O94761 1208 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 KIF4AO95239 1232 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 CTDNEP1O95476 244 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 PRKCBP05771 671 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 DCNP07585 359 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 SP9P0CG40 484 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 RAB33AQ14088 237 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 PUM1Q14671 1186 aaKnown RBP eCLIP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 MLF2Q15773 248 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 OTOGLQ3ZCN5 2332 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 EARS2Q5JPH6 523 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 ANKS3Q6ZW76 656 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 DIS3L2Q8IYB7 885 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 LNX1Q8TBB1 728 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 FGF13Q92913 245 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 CLSTN3Q9BQT9 956 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 PDZD7Q9H5P4 517 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 TOPORSQ9NS56 1045 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 GJB4Q9NTQ9 266 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 GDE1Q9NZC3 331 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 DLGAP2Q9P1A6 1054 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 POLIQ9UNA4 740 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 BACE2Q9Y5Z0 518 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 TRIP11Q15643 1979 aa8.84□□□□□ -0.99
NIF3L1-209ENST00000454952 CACNA1AO00555 2505 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 FAM205CA6NFA0 338 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 BTBD18B2RXH4 712 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 PTGESO14684 152 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 CCL16O15467 120 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 LAMTOR5O43504 91 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 ECI2O75521 394 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 B3GAT3O94766 335 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 SPATA31C1P0DKV0 1188 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 CYP11B2P19099 503 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 FGFR3P22607 806 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 RPA1P27694 616 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 ELF1P32519 619 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 YARSP54577 528 aaKnown RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 GPC5P78333 572 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 PABPC1LQ4VXU2 614 aaKnown RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 SLC44A4Q53GD3 710 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 ZBTB41Q5SVQ8 909 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 AXDND1Q5T1B0 1012 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 PADI6Q6TGC4 694 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 PARM1Q6UWI2 310 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 MAEAQ7L5Y9 396 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 DGLUCYQ7Z3D6 616 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 CDR2LQ86X02 465 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 CATSPER3Q86XQ3 398 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 SLC7A14Q8TBB6 771 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 HASPINQ8TF76 798 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 ATRIPQ8WXE1 791 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 KIFAP3Q92845 792 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 FGF14Q92915 247 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 IER2Q9BTL4 223 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 DDX23Q9BUQ8 820 aaKnown RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 FAM126AQ9BYI3 521 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 GPRC5CQ9NQ84 441 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 AVENQ9NQS1 362 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 SLC38A7Q9NVC3 462 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 SPATA6Q9NWH7 488 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 SNTG2Q9NY99 539 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 MTRRQ9UBK8 725 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 MRPS23Q9Y3D9 190 aaKnown RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 PCDHGA2Q9Y5H1 932 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.83□□□□□ -1
NIF3L1-209ENST00000454952 R4GN57 208 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 CITO14578 2027 aa8.83□□□□□ -1
NIF3L1-209ENST00000454952 PATJQ8NI35 1801 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 ZNF197O14709 1029 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 OR52Z1P0C646 297 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 FDPSP14324 419 aaKnown RBP8.82□□□□□ -1
NIF3L1-209ENST00000454952 MCM7P33993 719 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 OR1D2P34982 312 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 SNW1Q13573 536 aaKnown RBP8.82□□□□□ -1
NIF3L1-209ENST00000454952 PPP2R5DQ14738 602 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 UBXN2BQ14CS0 331 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 ATF7IP2Q5U623 682 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 ZNF852Q6ZMS4 543 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 NOSTRINQ8IVI9 506 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 NSUN7Q8NE18 718 aaKnown RBP8.82□□□□□ -1
NIF3L1-209ENST00000454952 RABGGTAQ92696 567 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 DNASE1L2Q92874 299 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 PAAF1Q9BRP4 392 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 CCDC94Q9BW85 323 aaPredicted RBP8.82□□□□□ -1
NIF3L1-209ENST00000454952 RAB34Q9BZG1 259 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 FOXQ1Q9C009 403 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 CCDC113Q9H0I3 377 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.82□□□□□ -1
NIF3L1-209ENST00000454952 KCNG1Q9UIX4 513 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 MAFFQ9ULX9 164 aa8.82□□□□□ -1
NIF3L1-209ENST00000454952 NOTCH4Q99466 2003 aa8.81□□□□□ -1
NIF3L1-209ENST00000454952 ZNF292O60281 2723 aa8.81□□□□□ -1
NIF3L1-209ENST00000454952 ARHGEF37A1IGU5 675 aa8.81□□□□□ -1
NIF3L1-209ENST00000454952 FAM170BA6NMN3 283 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms