RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GRIK3Q13003 919 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 KRT39Q6A163 491 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 GLB1LQ6UWU2 654 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ZNF365Q70YC5 407 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 CACTINQ8WUQ7 758 aaKnown RBP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ZNF516Q92618 1163 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 GAD1Q99259 594 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.464e-8■■□□□ 12.7
TRAF4-206ENST00000454852 TMEM117Q9H0C3 514 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 SLC38A7Q9NVC3 462 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 TAB2Q9NYJ8 693 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 KANSL3Q9P2N6 904 aa12.18□□□□□ -0.46
TRAF4-206ENST00000454852 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 UBQLN1Q9UMX0 589 aaKnown RBP12.18□□□□□ -0.46
TRAF4-206ENST00000454852 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 AP5Z1O43299 807 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 CBFA2T2O43439 604 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 DGKIO75912 1065 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 SERPINC1P01008 464 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 NFICP08651 508 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TRIM49P0CI25 452 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TRIM49CP0CI26 452 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 ACRP10323 421 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 SYN1P17600 705 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TNNI1P19237 187 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 LRPAP1P30533 357 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 PBX1P40424 430 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 MLH1P40692 756 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 MXI1P50539 228 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 UBASH3AP57075 661 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TMEM132DQ14C87 1099 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TCERG1LQ5VWI1 586 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 JADE1Q6IE81 842 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 OR5B17Q8NGF7 314 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 LPPQ93052 612 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 ZNF689Q96CS4 500 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 MRFAP1L1Q96HT8 127 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 NAP1L5Q96NT1 182 aaPredicted RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
TRAF4-206ENST00000454852 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 CXCL16Q9H2A7 254 aa12.17□□□□□ -0.46
TRAF4-206ENST00000454852 TRIP11Q15643 1979 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 TPM3P06753 285 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 THP07101 528 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 PAX3P23760 479 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 GCLMP48507 274 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 DSC1Q08554 894 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 CETN1Q12798 172 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 CBWD6Q4V339 395 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 CBWD3Q5JTY5 395 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 CBWD5Q5RIA9 395 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 TDRD10Q5VZ19 366 aaKnown RBP12.16□□□□□ -0.46
TRAF4-206ENST00000454852 TRAPPC11Q7Z392 1133 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 LMO3Q8TAP4 145 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 ZFP42Q96MM3 310 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 CASD1Q96PB1 797 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 RPS6KC1Q96S38 1066 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 GDF15Q99988 308 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 MRPL9Q9BYD2 267 aaKnown RBP12.16□□□□□ -0.46
TRAF4-206ENST00000454852 XPO4Q9C0E2 1151 aaKnown RBP12.16□□□□□ -0.46
TRAF4-206ENST00000454852 VPS16Q9H269 839 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 MTIF3Q9H2K0 278 aaKnown RBP12.16□□□□□ -0.46
TRAF4-206ENST00000454852 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 MIOSQ9NXC5 875 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 IFNKQ9P0W0 207 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 ITGA11Q9UKX5 1188 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 DAAM1Q9Y4D1 1078 aa12.16□□□□□ -0.46
TRAF4-206ENST00000454852 FNDC1Q4ZHG4 1894 aaPredicted RBP12.16□□□□□ -0.46
TRAF4-206ENST00000454852 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 ANO9A1A5B4 782 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 PIRO00625 290 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 ZC3H11AO75152 810 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TNNC2P02585 160 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-206ENST00000454852 KCNJ6P48051 423 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 SCNN1GP51170 649 aa12.15□□□□□ -0.46
TRAF4-206ENST00000454852 DEFB103AP81534 67 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms