RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 BORCS6Q96GS4 357 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 KXD1Q9BQD3 176 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 RPP25Q9BUL9 199 aaKnown RBP8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 KIFC3Q9BVG8 833 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 MRPL4Q9BYD3 311 aaKnown RBP8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 FOXQ1Q9C009 403 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 BHMT2Q9H2M3 363 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 FOXP1Q9H334 677 aaPredicted RBP8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 GDE1Q9NZC3 331 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 MTRRQ9UBK8 725 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 LIMCH1Q9UPQ0 1083 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 DNM3Q9UQ16 869 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 BACE2Q9Y5Z0 518 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 TRIOO75962 3097 aa8.6□□□□□ -1.03
AC007879.2-201ENST00000454444 RIF1Q5UIP0 2472 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 TMEM189-UBE2V1I3L0A0 370 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ZNF197O14709 1029 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ADAM12O43184 909 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 PAPLNO95428 1278 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 LARGE1O95461 756 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 RHOP08100 348 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 POU2F2P09086 479 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 PTPN2P17706 415 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 FGFR3P22607 806 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 MARCKSP29966 332 aaPredicted RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 MATR3P43243 847 aaKnown RBP eCLIP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 MAGEA9P43362 315 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 TRAPPC10P48553 1259 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 HMGN5P82970 282 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 STRN3Q13033 797 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 PPP2R5DQ14738 602 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ZRSR1Q15695 479 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ZNF568Q3ZCX4 644 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 RSPO2Q6UXX9 243 aaPredicted RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 DGLUCYQ7Z3D6 616 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ZNF461Q8TAF7 563 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 BSNDQ8WZ55 320 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 ACAP3Q96P50 834 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 LLPHQ9BRT6 129 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 CYP4F11Q9HBI6 524 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 POLD4Q9HCU8 107 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 KMT5AQ9NQR1 393 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 DNMT3BQ9UBC3 853 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 TNFSF13BQ9Y275 285 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 USP20Q9Y2K6 914 aa8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
AC007879.2-201ENST00000454444 SMIM28A0A1B0GU29 152 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 TTLL13PA6NNM8 815 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 I3L4J1 428 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PODXLO00592 558 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 WNT7AO00755 349 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 SYN3O14994 580 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 ECI2O75521 394 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 SDHBP21912 280 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 TKTP29401 623 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 RPL9P32969 192 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 MCM4P33991 863 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 GRM5P41594 1212 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 BRCC3P46736 316 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 SMTNP53814 917 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PEX3P56589 373 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PDIA5Q14554 519 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PUM1Q14671 1186 aaKnown RBP eCLIP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 UPP1Q16831 310 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 CTXN3Q4LDR2 81 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 NT5DC1Q5TFE4 455 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 EEF1DP3Q658K8 133 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 TPRG1Q6ZUI0 275 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PDZD4Q76G19 769 aaPredicted RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 CCDC83Q8IWF9 413 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 APPL2Q8NEU8 664 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 ZSCAN31Q96LW9 406 aaPredicted RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 ZNF512Q96ME7 567 aaPredicted RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 OSBPL6Q9BZF3 934 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 BRD9Q9H8M2 597 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 ZFP14Q9HCL3 533 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 DDX19AQ9NUU7 478 aaKnown RBP8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 HCFC1R1Q9NWW0 138 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 FBXO4Q9UKT5 387 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 RAB23Q9ULC3 237 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 WDR81Q562E7 1941 aa8.58□□□□□ -1.04
AC007879.2-201ENST00000454444 FAM186AA6NE01 2351 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 MAN2B1O00754 1011 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 SPTLC1O15269 473 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 HIP1RO75146 1068 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 LRRN2O75325 713 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 MCF2P10911 925 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 CD72P21854 359 aa8.57□□□□□ -1.04
AC007879.2-201ENST00000454444 NPTX2P47972 431 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms