RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PPP1R10Q96QC0 940 aaKnown RBP26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 KXD1Q9BQD3 176 aa26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 FOXP1Q9H334 677 aaPredicted RBP26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 SPATA6Q9NWH7 488 aaPredicted RBP26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 HCFC1R1Q9NWW0 138 aa26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 DNMT3BQ9UBC3 853 aaKnown RBP26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 BACE2Q9Y5Z0 518 aa26.09■■□□□ 1.77
LYSMD2-202ENST00000454181 CCDC169A6NNP5 214 aa26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 EDN1P05305 212 aa26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 ELF1P32519 619 aa26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 LRWD1Q9UFC0 647 aa26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 NOL7Q9UMY1 257 aaKnown RBP26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 KIAA1024Q9UPX6 916 aa26.08■■□□□ 1.77
LYSMD2-202ENST00000454181 LAMTOR5O43504 91 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 TKTP29401 623 aaKnown RBP26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 UPP1Q16831 310 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 NPAS3Q8IXF0 933 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 ING5Q8WYH8 240 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 DDX27Q96GQ7 796 aaKnown RBP26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 RAB34Q9BZG1 259 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 SLC38A7Q9NVC3 462 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 TNFSF13BQ9Y275 285 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 STK24Q9Y6E0 443 aa26.07■■□□□ 1.76
LYSMD2-202ENST00000454181 FAM170BA6NMN3 283 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 I3L4J1 428 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 LRRN2O75325 713 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 LRG1P02750 347 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 RSPO2Q6UXX9 243 aaPredicted RBP26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 KIAA2013Q8IYS2 634 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 RUBCNQ92622 972 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 GOLGA2P5Q9HBQ8 144 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 LIMCH1Q9UPQ0 1083 aa26.06■■□□□ 1.76
LYSMD2-202ENST00000454181 SMIM28A0A1B0GU29 152 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 PRRG1O14668 218 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 KINO60870 393 aaKnown RBP26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 GLULP15104 373 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 BRCC3P46736 316 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 TRAPPC10P48553 1259 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 FXR2P51116 673 aaKnown RBP eCLIP26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 OSTNP61366 133 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 ZNF568Q3ZCX4 644 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 CCDC83Q8IWF9 413 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 FAM184AQ8NB25 1140 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 MCRS1Q96EZ8 462 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 LLPHQ9BRT6 129 aaKnown RBP26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 TCHPQ9BT92 498 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 OSBPL6Q9BZF3 934 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 DDX19AQ9NUU7 478 aaKnown RBP26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 GDE1Q9NZC3 331 aa26.05■■□□□ 1.76
LYSMD2-202ENST00000454181 NCAM2O15394 837 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 PTPN2P17706 415 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 IGFBP6P24592 240 aaPredicted RBP26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 GRM5P41594 1212 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 PEX3P56589 373 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 ZNF461Q8TAF7 563 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 NELL2Q99435 816 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 DDX23Q9BUQ8 820 aaKnown RBP26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 MRPL4Q9BYD3 311 aaKnown RBP26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 PHLPP2Q6ZVD8 1323 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 DOCK6Q96HP0 2047 aa26.04■■□□□ 1.76
LYSMD2-202ENST00000454181 ECI2O75521 394 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 RHOP08100 348 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 MAGEA9P43362 315 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 ARPP19P56211 112 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 ST3GAL1Q11201 340 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 DMP1Q13316 513 aaPredicted RBP26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 ECM1Q16610 540 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 ZBTB41Q5SVQ8 909 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 SNX29Q8TEQ0 813 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 BORCS6Q96GS4 357 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 ACO2Q99798 780 aaKnown RBP26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 FBXO4Q9UKT5 387 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 DNM3Q9UQ16 869 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 NUB1Q9Y5A7 615 aa26.03■■□□□ 1.76
LYSMD2-202ENST00000454181 H7C4K7 107 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 NPTX2P47972 431 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 HMGN5P82970 282 aaKnown RBP26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 ROR1Q01973 937 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 PDIA5Q14554 519 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 VARS2Q5ST30 1063 aaKnown RBP26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 C3orf58Q8NDZ4 430 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 FBXO18Q8NFZ0 1043 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 ACAP3Q96P50 834 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 CDT1Q9H211 546 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 TMEM134Q9H6X4 195 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 LTB4R2Q9NPC1 389 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 KMT5AQ9NQR1 393 aa26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 MRPS17Q9Y2R5 130 aaKnown RBP26.02■■□□□ 1.76
LYSMD2-202ENST00000454181 ZNF292O60281 2723 aa26.01■■□□□ 1.76
LYSMD2-202ENST00000454181 WDR87Q6ZQQ6 2873 aa26.01■■□□□ 1.76
LYSMD2-202ENST00000454181 PODXLO00592 558 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 CD72P21854 359 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 CSTF1Q05048 431 aaKnown RBP26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 ZNF528Q3MIS6 628 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 KRT79Q5XKE5 535 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 SLC8B1Q6J4K2 584 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 CD300LGQ6UXG3 332 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 TPRG1Q6ZUI0 275 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 CEP120Q8N960 986 aa26.01■■□□□ 1.75
LYSMD2-202ENST00000454181 ATRIPQ8WXE1 791 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms