RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC10A6Q3KNW5 377 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 KANK3Q6NY19 840 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 EPM2AIP1Q7L775 607 aaPredicted RBP21.75■■□□□ 1.07
COL9A3-202ENST00000452372 SYCP3Q8IZU3 236 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 VN1R2Q8NFZ6 395 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 ZNF507Q8TCN5 953 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 SNX27Q96L92 541 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 PPP1R10Q96QC0 940 aaKnown RBP21.75■■□□□ 1.07
COL9A3-202ENST00000452372 MSTO1Q9BUK6 570 aa21.75■■□□□ 1.07
COL9A3-202ENST00000452372 TISP43B9A030 160 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 MEFVO15553 781 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-202ENST00000452372 KCNE1P15382 129 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 ADSSP30520 456 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 NDUFV1P49821 464 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 FAM160A1Q05DH4 1040 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 PDE12Q6L8Q7 609 aaKnown RBP21.74■■□□□ 1.07
COL9A3-202ENST00000452372 DDX53Q86TM3 631 aaKnown RBP21.74■■□□□ 1.07
COL9A3-202ENST00000452372 TMEM87AQ8NBN3 555 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 SMRP1Q8NCR6 262 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 BCL7CQ8WUZ0 217 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-202ENST00000452372 PPP2R3CQ969Q6 453 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 CCDC34Q96HJ3 373 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 COLEC11Q9BWP8 271 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 TLE6Q9H808 572 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 CNTN3Q9P232 1028 aa21.74■■□□□ 1.07
COL9A3-202ENST00000452372 MUC6Q6W4X9 2439 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 ALADP13716 330 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 HOXD13P35453 343 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 TNFSF9P41273 254 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 PSMD2Q13200 908 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 KCNC3Q14003 757 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 GLRA4Q5JXX5 417 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 MICAL1Q8TDZ2 1067 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 POMGNT1Q8WZA1 660 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 ZMAT2Q96NC0 199 aaKnown RBP21.73■■□□□ 1.07
COL9A3-202ENST00000452372 PLEKHA5Q9HAU0 1116 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 SLC39A2Q9NP94 309 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 MARCH5Q9NX47 278 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 STK39Q9UEW8 545 aa21.73■■□□□ 1.07
COL9A3-202ENST00000452372 CPSF3Q9UKF6 684 aaKnown RBP21.73■■□□□ 1.07
COL9A3-202ENST00000452372 AGO2Q9UKV8 859 aaKnown RBP21.73■■□□□ 1.07
COL9A3-202ENST00000452372 BARX2Q9UMQ3 279 aaPredicted RBP21.73■■□□□ 1.07
COL9A3-202ENST00000452372 PRG3Q9Y2Y8 225 aaPredicted RBP21.73■■□□□ 1.07
COL9A3-202ENST00000452372 TTC26A0AVF1 554 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 GADD45BO75293 160 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-202ENST00000452372 RPN1P04843 607 aaKnown RBP21.72■■□□□ 1.07
COL9A3-202ENST00000452372 ADRB2P07550 413 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 PRR29P0C7W0 189 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 GARTP22102 1010 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 DPYDQ12882 1025 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 DUSP6Q16828 381 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 ZBTB41Q5SVQ8 909 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 TCF25Q9BQ70 676 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 RPF1Q9H9Y2 349 aaKnown RBP21.72■■□□□ 1.07
COL9A3-202ENST00000452372 NGRNQ9NPE2 291 aaKnown RBP21.72■■□□□ 1.07
COL9A3-202ENST00000452372 EXOC1Q9NV70 894 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 SLC38A7Q9NVC3 462 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 UBE4BO95155 1302 aa21.72■■□□□ 1.07
COL9A3-202ENST00000452372 TECTAO75443 2155 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 DCXO43602 365 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 CXCL8P10145 99 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 POU5F1Q01860 360 aaKnown RBP21.71■■□□□ 1.07
COL9A3-202ENST00000452372 STK4Q13043 487 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 HSP90AA2PQ14568 343 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-202ENST00000452372 ENOX2Q16206 610 aaKnown RBP21.71■■□□□ 1.07
COL9A3-202ENST00000452372 TMC7Q7Z402 723 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 VPS52Q8N1B4 723 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 SCFD1Q8WVM8 642 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 TIGD1Q96MW7 591 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 PAAF1Q9BRP4 392 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 VN1R3Q9BXE9 311 aa21.71■■□□□ 1.07
COL9A3-202ENST00000452372 ARIH1Q9Y4X5 557 aaPredicted RBP21.71■■□□□ 1.07
COL9A3-202ENST00000452372 CASTOR2A6NHX0 329 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 HIDE1A8MVS5 230 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 PRR33A8MZF0 331 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 EFEMP2O95967 443 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 PLA2G5P39877 138 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 ACOT2P49753 483 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
COL9A3-202ENST00000452372 BMT2Q1RMZ1 405 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 TMEM184AQ6ZMB5 413 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 CCDC47Q96A33 483 aaKnown RBP21.7■■□□□ 1.06
COL9A3-202ENST00000452372 UROC1Q96N76 676 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 TSPAN18Q96SJ8 248 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 ZBP1Q9H171 429 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 ENTPD7Q9NQZ7 604 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 CACNG4Q9UBN1 327 aa21.7■■□□□ 1.06
COL9A3-202ENST00000452372 PDCD11Q14690 1871 aaKnown RBP21.7■■□□□ 1.06
COL9A3-202ENST00000452372 LACTBL1A8MY62 500 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 F8W810 466 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 RHOBTB3O94955 611 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 LDHAP00338 332 aaKnown RBP21.69■■□□□ 1.06
COL9A3-202ENST00000452372 PPP2R3AQ06190 1150 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 SOX4Q06945 474 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-202ENST00000452372 PLPP4Q5VZY2 271 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 CRELD2Q6UXH1 353 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-202ENST00000452372 CLEC17AQ6ZS10 378 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 RNF135Q8IUD6 432 aa21.69■■□□□ 1.06
COL9A3-202ENST00000452372 CD302Q8IX05 232 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms