RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 FGFR3P22607 806 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 STARD6P59095 220 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 SLC7A14Q8TBB6 771 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 FGF13Q92913 245 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 FGF14Q92915 247 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 TOPORSQ9NS56 1045 aaPredicted RBP11.98□□□□□ -0.49
USP1-204ENST00000452143 DLGAP2Q9P1A6 1054 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 TNFSF13BQ9Y275 285 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 GDAQ9Y2T3 454 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 BACE2Q9Y5Z0 518 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 MYH11P35749 1972 aa11.98□□□□□ -0.49
USP1-204ENST00000452143 MAP3K13O43283 966 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 LMNAP02545 664 aaKnown RBP11.97□□□□□ -0.49
USP1-204ENST00000452143 LIG1P18858 919 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 OR1D2P34982 312 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 CCT6AP40227 531 aaKnown RBP11.97□□□□□ -0.49
USP1-204ENST00000452143 HMGN5P82970 282 aaKnown RBP11.97□□□□□ -0.49
USP1-204ENST00000452143 PFKPQ01813 784 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 GUCY1B3Q02153 619 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 UPP1Q16831 310 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 AXDND1Q5T1B0 1012 aaPredicted RBP11.97□□□□□ -0.49
USP1-204ENST00000452143 EEF1DP3Q658K8 133 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 PARM1Q6UWI2 310 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 ANKS3Q6ZW76 656 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 ERMP1Q7Z2K6 904 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 FBXO18Q8NFZ0 1043 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 SLC38A7Q9NVC3 462 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
USP1-204ENST00000452143 LIMCH1Q9UPQ0 1083 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 CDY1Q9Y6F8 540 aa11.97□□□□□ -0.49
USP1-204ENST00000452143 K7ERI5 159 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 CCL16O15467 120 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 ADAM12O43184 909 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 DCNP07585 359 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 GRM5P41594 1212 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 CLCNKBP51801 687 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 YARSP54577 528 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 NTHL1P78549 312 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 PRKCQQ04759 706 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 DMP1Q13316 513 aaPredicted RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 PDIA5Q14554 519 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 ZNF174Q15697 407 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 PABPC1LQ4VXU2 614 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 GLRA4Q5JXX5 417 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 SPECC1Q5M775 1068 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 RSPO2Q6UXX9 243 aaPredicted RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 C1orf210Q8IVY1 113 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 IGSF22Q8N9C0 903 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
USP1-204ENST00000452143 OSBPL6Q9BZF3 934 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 CXCL16Q9H2A7 254 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 C17orf75Q9HAS0 396 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 LRWD1Q9UFC0 647 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 POLIQ9UNA4 740 aa11.96□□□□□ -0.49
USP1-204ENST00000452143 KANSL1LA0AUZ9 987 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 LAD1O00515 517 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 MAGEA9P43362 315 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 ID4P47928 161 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 GPC5P78333 572 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 MLF2Q15773 248 aaPredicted RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 ECM1Q16610 540 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 ZNF568Q3ZCX4 644 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 NT5DC1Q5TFE4 455 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 SLC8B1Q6J4K2 584 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 CCDC83Q8IWF9 413 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 ITFG1Q8TB96 612 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 SNX29Q8TEQ0 813 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 BORCS6Q96GS4 357 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 MRPL4Q9BYD3 311 aaKnown RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 FOXQ1Q9C009 403 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 CDT1Q9H211 546 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 AVENQ9NQS1 362 aaPredicted RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 DDX19AQ9NUU7 478 aaKnown RBP11.95□□□□□ -0.5
USP1-204ENST00000452143 GDE1Q9NZC3 331 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 ARHGAP28Q9P2N2 729 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
USP1-204ENST00000452143 GPR179Q6PRD1 2367 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 SMIM28A0A1B0GU29 152 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 SYN3O14994 580 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 SP9P0CG40 484 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 MCF2P10911 925 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 GLULP15104 373 aa11.94□□□□□ -0.5
USP1-204ENST00000452143 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP1-204ENST00000452143 NPTX2P47972 431 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms