RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ARSHQ5FYA8 562 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 GPBP1Q86WP2 473 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 PALB2Q86YC2 1186 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 NTPCRQ9BSD7 190 aaKnown RBP19.23■□□□□ 0.67
FAM3A-216ENST00000449971 COLEC11Q9BWP8 271 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 MRPL4Q9BYD3 311 aaKnown RBP19.23■□□□□ 0.67
FAM3A-216ENST00000449971 FOXQ1Q9C009 403 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 ARHGAP28Q9P2N2 729 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 STK39Q9UEW8 545 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 GDAQ9Y2T3 454 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 SIT1Q9Y3P8 196 aa19.23■□□□□ 0.67
FAM3A-216ENST00000449971 NCOR2Q9Y618 2525 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 RECQL4O94761 1208 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 SOD2P04179 222 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 SP9P0CG40 484 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 GRIK3Q13003 919 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 MCM6Q14566 821 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 ELMSAN1Q6PJG2 1045 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 ZC3H14Q6PJT7 736 aaKnown RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 TAS1R3Q7RTX0 852 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 CMASQ8NFW8 434 aaPredicted RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 LRRC15Q8TF66 581 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 SPIRE2Q8WWL2 714 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 RABGGTAQ92696 567 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 EPSTI1Q96J88 318 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 CLIC6Q96NY7 704 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 ACO2Q99798 780 aaKnown RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 HERC2P3Q9BVR0 1158 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 TARS2Q9BW92 718 aaKnown RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 CCSER1Q9C0I3 900 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 ARHGEF3Q9NR81 526 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 BLOC1S4Q9NUP1 217 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 MARCH5Q9NX47 278 aa19.22■□□□□ 0.67
FAM3A-216ENST00000449971 FBXO2Q9UK22 296 aaPredicted RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 SRPRBQ9Y5M8 271 aaKnown RBP19.22■□□□□ 0.67
FAM3A-216ENST00000449971 LRRN2O75325 713 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 GLUD2P49448 558 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 CACNA1BQ00975 2339 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 STRN3Q13033 797 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 PUM1Q14671 1186 aaKnown RBP eCLIP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 USP49Q70CQ1 688 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 C1orf210Q8IVY1 113 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 RAD54LQ92698 747 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 B3GALT6Q96L58 329 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 LARSQ9P2J5 1176 aaKnown RBP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 EPS15L1Q9UBC2 864 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 DAXXQ9UER7 740 aaPredicted RBP19.21■□□□□ 0.67
FAM3A-216ENST00000449971 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 CEP250Q9BV73 2442 aa19.21■□□□□ 0.67
FAM3A-216ENST00000449971 ZMYM2Q9UBW7 1377 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 F8W810 466 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 THP07101 528 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 ZNF568Q3ZCX4 644 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 DCLRE1AQ6PJP8 1040 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 SPRYD3Q8NCJ5 442 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 TMEM161BQ8NDZ6 487 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 RUBCNQ92622 972 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 REEP2Q9BRK0 252 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 CXCL16Q9H2A7 254 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 ODF2LQ9ULJ1 636 aa19.2■□□□□ 0.66
FAM3A-216ENST00000449971 OTOGLQ3ZCN5 2332 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 CACNA1IQ9P0X4 2223 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 PTGESO14684 152 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 TADA2AO75478 443 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 FAM13AO94988 1023 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 DDIT3P35638 169 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 TXLNAP40222 546 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 OSTNP61366 133 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 TUSC3Q13454 348 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 MYCT1Q8N699 235 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 LARP4BQ92615 738 aaKnown RBP19.19■□□□□ 0.66
FAM3A-216ENST00000449971 ZNF707Q96C28 371 aaPredicted RBP19.19■□□□□ 0.66
FAM3A-216ENST00000449971 CCDC94Q9BW85 323 aaPredicted RBP19.19■□□□□ 0.66
FAM3A-216ENST00000449971 CDT1Q9H211 546 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 PTPRHQ9HD43 1115 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
FAM3A-216ENST00000449971 CACNG4Q9UBN1 327 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 DPP7Q9UHL4 492 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 SSX2IPQ9Y2D8 614 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 NUMBLQ9Y6R0 609 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 GPR179Q6PRD1 2367 aa19.19■□□□□ 0.66
FAM3A-216ENST00000449971 DOCK8Q8NF50 2099 aa19.18■□□□□ 0.66
FAM3A-216ENST00000449971 SPTBN2O15020 2390 aa19.18■□□□□ 0.66
FAM3A-216ENST00000449971 CASTOR2A6NHX0 329 aa19.18■□□□□ 0.66
FAM3A-216ENST00000449971 H0YCG3 227 aa19.18■□□□□ 0.66
FAM3A-216ENST00000449971 MAPTP10636 758 aaKnown RBP19.18■□□□□ 0.66
FAM3A-216ENST00000449971 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
FAM3A-216ENST00000449971 RPL17P18621 184 aaKnown RBP19.18■□□□□ 0.66
FAM3A-216ENST00000449971 YARSP54577 528 aaKnown RBP19.18■□□□□ 0.66
FAM3A-216ENST00000449971 STK38Q15208 465 aa19.18■□□□□ 0.66
FAM3A-216ENST00000449971 RSPO4Q2I0M5 234 aaPredicted RBP19.18■□□□□ 0.66
FAM3A-216ENST00000449971 RRAGBQ5VZM2 374 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms