RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SMG8Q8ND04 991 aaKnown RBP9.99□□□□□ -0.81
RFX3-207ENST00000449190 URGCPQ8TCY9 931 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 LPPQ93052 612 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 PPP2R3CQ969Q6 453 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 RPS6KC1Q96S38 1066 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 FAM213AQ9BRX8 229 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 RPF1Q9H9Y2 349 aaKnown RBP9.99□□□□□ -0.81
RFX3-207ENST00000449190 RSAD1Q9HA92 442 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 AGPAT3Q9NRZ7 376 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 SNTG2Q9NY99 539 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 SPG21Q9NZD8 308 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 FRMD4BQ9Y2L6 1034 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 STYXL1Q9Y6J8 313 aa9.99□□□□□ -0.81
RFX3-207ENST00000449190 ZNF233A6NK53 670 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 CETN3O15182 167 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 INPPL1O15357 1258 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 TGFB1I1O43294 461 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 EXTL3O43909 919 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 EXOC3O60645 756 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 ALDH2P05091 517 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 CCDC192P0DO97 292 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 BMP1P13497 986 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 AKAP5P24588 427 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 CCNE1P24864 410 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 DNAJB1P25685 340 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 HOXD13P35453 343 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 BCAR1P56945 870 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 RNASELQ05823 741 aaKnown RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 LRRC63Q05C16 580 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 PAK1Q13153 545 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 STX1AQ16623 288 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 CENPPQ6IPU0 288 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 SLC39A4Q6P5W5 647 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 RBM43Q6ZSC3 357 aaKnown RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 CD302Q8IX05 232 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 SLC39A11Q8N1S5 342 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 GPD1LQ8N335 351 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 XXYLT1Q8NBI6 393 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 NELFBQ8WX92 580 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 PABPC5Q96DU9 382 aaKnown RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 FAM193BQ96PV7 902 aaPredicted RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 COL25A1Q9BXS0 654 aaPredicted RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 NAT10Q9H0A0 1025 aaKnown RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 KCTD10Q9H3F6 313 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 NXF3Q9H4D5 531 aaKnown RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 NRDE2Q9H7Z3 1164 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 UBE2ZQ9H832 354 aaPredicted RBP9.98□□□□□ -0.81
RFX3-207ENST00000449190 TBC1D13Q9NVG8 400 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 HSPBP1Q9NZL4 362 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 TRAF3IP3Q9Y228 551 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 HES2Q9Y543 173 aa9.98□□□□□ -0.81
RFX3-207ENST00000449190 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 MEIS3P2A8K0S8 358 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 PPP1R3GB7ZBB8 358 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 TISP43B9A030 160 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 FSCN2O14926 492 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 NR3C1P04150 777 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 GALTP07902 379 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ADSSP30520 456 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 IRS1P35568 1242 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ACOT2P49753 483 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ERVFC1P60507 584 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 FKBP3Q00688 224 aaKnown RBP9.97□□□□□ -0.81
RFX3-207ENST00000449190 POU5F1Q01860 360 aaKnown RBP9.97□□□□□ -0.81
RFX3-207ENST00000449190 TFF2Q03403 129 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 PPP2R3AQ06190 1150 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ADAM9Q13443 819 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ADAM15Q13444 863 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 BMS1Q14692 1282 aaKnown RBP9.97□□□□□ -0.81
RFX3-207ENST00000449190 SURF1Q15526 300 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 EDRF1Q3B7T1 1238 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 PUS10Q3MIT2 529 aaKnown RBP9.97□□□□□ -0.81
RFX3-207ENST00000449190 LEXMQ3ZCV2 418 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 SEZ6Q53EL9 994 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 CEP135Q66GS9 1140 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ANKRD40Q6AI12 368 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 SLC9A9Q8IVB4 645 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 C12orf56Q8IXR9 622 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 SAAL1Q96ER3 474 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 TMEM175Q9BSA9 504 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 IKZF4Q9H2S9 585 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 PLEKHA5Q9HAU0 1116 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 NGRNQ9NPE2 291 aaKnown RBP9.97□□□□□ -0.81
RFX3-207ENST00000449190 TLR9Q9NR96 1032 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 KLK14Q9P0G3 267 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 CTNND2Q9UQB3 1225 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
RFX3-207ENST00000449190 ARL5CA6NH57 179 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 ABLIM1O14639 778 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 XPOTO43592 962 aaKnown RBP9.96□□□□□ -0.82
RFX3-207ENST00000449190 RECQL4O94761 1208 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 DDHD2O94830 711 aa9.96□□□□□ -0.82
RFX3-207ENST00000449190 IL18RAPO95256 599 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms