RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 UROC1Q96N76 676 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
TRA2A-203ENST00000448549 FOXQ1Q9C009 403 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 CDT1Q9H211 546 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 DLGAP2Q9P1A6 1054 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 DNMT3BQ9UBC3 853 aaKnown RBP17.06■□□□□ 0.32
TRA2A-203ENST00000448549 BACE2Q9Y5Z0 518 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 DMDP11532 3685 aa17.06■□□□□ 0.32
TRA2A-203ENST00000448549 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
TRA2A-203ENST00000448549 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 POU2F2P09086 479 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 GRM5P41594 1212 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 STARD6P59095 220 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 ZNF568Q3ZCX4 644 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 PABPC1LQ4VXU2 614 aaKnown RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 ALKAL1Q6UXT8 129 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 ANKS3Q6ZW76 656 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 DAW1Q8N136 415 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 DDX27Q96GQ7 796 aaKnown RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 SHDQ96IW2 340 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 ZSCAN31Q96LW9 406 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 PTPRHQ9HD43 1115 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
TRA2A-203ENST00000448549 DNM3Q9UQ16 869 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 PCDHB6Q9Y5E3 794 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 R4GN57 208 aa17.05■□□□□ 0.32
TRA2A-203ENST00000448549 PHLPP2Q6ZVD8 1323 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 HIP1RO75146 1068 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 LRRN2O75325 713 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 GLULP15104 373 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.327e-8■■□□□ 12.5
TRA2A-203ENST00000448549 CDC25AP30304 524 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
TRA2A-203ENST00000448549 IL17AQ16552 155 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 C1orf210Q8IVY1 113 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 NPAS3Q8IXF0 933 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 PJA1Q8NG27 643 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 ING5Q8WYH8 240 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 ZMAT2Q96NC0 199 aaKnown RBP17.04■□□□□ 0.32
TRA2A-203ENST00000448549 KXD1Q9BQD3 176 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
TRA2A-203ENST00000448549 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
TRA2A-203ENST00000448549 RAB34Q9BZG1 259 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 TMEM134Q9H6X4 195 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 KMT5AQ9NQR1 393 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
TRA2A-203ENST00000448549 PTPRZ1P23471 2315 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-203ENST00000448549 SLC44A4Q53GD3 710 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 RTL10Q7L3V2 364 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
TRA2A-203ENST00000448549 SLC38A7Q9NVC3 462 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 ARHGAP28Q9P2N2 729 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 KCNH3Q9ULD8 1083 aa17.03■□□□□ 0.32
TRA2A-203ENST00000448549 MRPS23Q9Y3D9 190 aaKnown RBP17.03■□□□□ 0.32
TRA2A-203ENST00000448549 KANSL1LA0AUZ9 987 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 SFI1A8K8P3 1242 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 PODXLO00592 558 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 LMNAP02545 664 aaKnown RBP17.02■□□□□ 0.32
TRA2A-203ENST00000448549 SP9P0CG40 484 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ARPP19P56211 112 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ROR1Q01973 937 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 MAPK7Q13164 816 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 SLC5A9Q2M3M2 681 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 VARS2Q5ST30 1063 aaKnown RBP17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 SLC8B1Q6J4K2 584 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 RINT1Q6NUQ1 792 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 KCNK18Q7Z418 384 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ZNF461Q8TAF7 563 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 MCRS1Q96EZ8 462 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 DRC1Q96MC2 740 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ACAP3Q96P50 834 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 KIF2CQ99661 725 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 SEMA4AQ9H3S1 761 aa17.02■□□□□ 0.32
TRA2A-203ENST00000448549 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
TRA2A-203ENST00000448549 ABLIM1O14639 778 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 SLC16A4O15374 487 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 MEFVO15553 781 aaPredicted RBP17.01■□□□□ 0.31
TRA2A-203ENST00000448549 ABLIM3O94929 683 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 RHOP08100 348 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 MCF2P10911 925 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
TRA2A-203ENST00000448549 KCNE1P15382 129 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 PROZP22891 400 aa17.01■□□□□ 0.31
TRA2A-203ENST00000448549 ZRSR1Q15695 479 aaKnown RBP17.01■□□□□ 0.31
TRA2A-203ENST00000448549 MLF2Q15773 248 aaPredicted RBP17.01■□□□□ 0.31
TRA2A-203ENST00000448549 POTEHQ6S545 545 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms