RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 KRT9P35527 623 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 GTF2BQ00403 316 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 UBE3AQ05086 875 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 KCNA1Q09470 495 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 ZC2HC1CQ53FD0 456 aaPredicted RBP15.85■□□□□ 0.13
CDK3-202ENST00000448471 SPOUT1Q5T280 376 aaKnown RBP15.85■□□□□ 0.13
CDK3-202ENST00000448471 TMTC1Q8IUR5 882 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 SLC9A9Q8IVB4 645 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 OR8K1Q8NGG5 319 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 ATP8B4Q8TF62 1192 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 ATOH1Q92858 354 aaPredicted RBP15.85■□□□□ 0.13
CDK3-202ENST00000448471 HVCN1Q96D96 273 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 PCYT2Q99447 389 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 CELF4Q9BZC1 486 aaKnown RBP15.85■□□□□ 0.13
CDK3-202ENST00000448471 EDEM3Q9BZQ6 932 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 IRF2BPLQ9H1B7 796 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 CYP26B1Q9NR63 512 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 TLR9Q9NR96 1032 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 DMAC2Q9NW81 257 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 ARMCX3Q9UH62 379 aaPredicted RBP15.85■□□□□ 0.13
CDK3-202ENST00000448471 KCNG1Q9UIX4 513 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 PCDHB12Q9Y5F1 795 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDK3-202ENST00000448471 PLXNA4Q9HCM2 1894 aa15.85■□□□□ 0.13
CDK3-202ENST00000448471 TMEM150BA6NC51 233 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 K7ENM7 598 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 EPB41P11171 864 aaKnown RBP15.84■□□□□ 0.13
CDK3-202ENST00000448471 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
CDK3-202ENST00000448471 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 DUSP6Q16828 381 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 C12orf56Q8IXR9 622 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 CDCA3Q99618 268 aaPredicted RBP15.84■□□□□ 0.13
CDK3-202ENST00000448471 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
CDK3-202ENST00000448471 NIFKQ9BYG3 293 aaKnown RBP15.84■□□□□ 0.13
CDK3-202ENST00000448471 AAASQ9NRG9 546 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 PPME1Q9Y570 386 aa15.84■□□□□ 0.13
CDK3-202ENST00000448471 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.13
CDK3-202ENST00000448471 KIF2AO00139 706 aaPredicted RBP15.83■□□□□ 0.13
CDK3-202ENST00000448471 ZSCAN12O43309 604 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 OATP04181 439 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 TUBB4AP04350 444 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 ABCD1P33897 745 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 SMTNP53814 917 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 ERVFC1P60507 584 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 ZBED6P86452 979 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 NFX1Q12986 1120 aaKnown RBP15.83■□□□□ 0.13
CDK3-202ENST00000448471 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.13
CDK3-202ENST00000448471 FAM102BQ5T8I3 360 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 FAM160B1Q5W0V3 765 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 NYAP1Q6ZVC0 841 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 MAEAQ7L5Y9 396 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 KCNN1Q92952 543 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 AZI2Q9H6S1 392 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 ATP6V0A4Q9HBG4 840 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 AGPAT3Q9NRZ7 376 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 SEPT9Q9UHD8 586 aaPredicted RBP15.83■□□□□ 0.13
CDK3-202ENST00000448471 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.13
CDK3-202ENST00000448471 USP34Q70CQ2 3546 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 USP27XA6NNY8 438 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 TBKBP1A7MCY6 615 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 TRIOO75962 3097 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 AKAP3O75969 853 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 FGF18O76093 207 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 ATP4AP20648 1035 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 SCP2P22307 547 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 DMP1Q13316 513 aaPredicted RBP15.83■□□□□ 0.12
CDK3-202ENST00000448471 PLCB4Q15147 1175 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 TSR1Q2NL82 804 aaKnown RBP15.83■□□□□ 0.12
CDK3-202ENST00000448471 CYP26C1Q6V0L0 522 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 HAUS6Q7Z4H7 955 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 ZBTB33Q86T24 672 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 THNSL1Q8IYQ7 743 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 ZNF397Q8NF99 534 aaPredicted RBP15.83■□□□□ 0.12
CDK3-202ENST00000448471 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.12
CDK3-202ENST00000448471 MYH9P35579 1960 aaKnown RBP15.82■□□□□ 0.12
CDK3-202ENST00000448471 SMIM35A0A1B0GVV1 85 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 GOLGA6L9A6NEM1 432 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 H0Y858 1186 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 MGEA5O60502 916 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 PDGFBP01127 241 aaPredicted RBP15.82■□□□□ 0.12
CDK3-202ENST00000448471 SRGAP2BP0DMP2 458 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
CDK3-202ENST00000448471 PEX3P56589 373 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 MEA1Q16626 185 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 SYCP3Q8IZU3 236 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 BORCS6Q96GS4 357 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 PPP1R13BQ96KQ4 1090 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 FAM167AQ96KS9 214 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
CDK3-202ENST00000448471 SH2D3AQ9BRG2 576 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 S1PR5Q9H228 398 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 DHX33Q9H6R0 707 aaKnown RBP15.82■□□□□ 0.12
CDK3-202ENST00000448471 GPRC5CQ9NQ84 441 aa15.82■□□□□ 0.12
CDK3-202ENST00000448471 XPNPEP1Q9NQW7 623 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms